Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 AL162726.2-201ENST00000438986 1017 ntBASIC17.41■□□□□ 0.38
TNFRSF25Q93038 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 AC022137.2-201ENST00000503482 481 ntBASIC17.41■□□□□ 0.38
TNFRSF25Q93038 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 AP001063.1-201ENST00000568332 529 ntBASIC17.41■□□□□ 0.38
TNFRSF25Q93038 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 AP005019.2-201ENST00000615104 511 ntBASIC17.41■□□□□ 0.38
TNFRSF25Q93038 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFRSF25Q93038 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 AC114812.1-204ENST00000449669 728 ntBASIC17.4■□□□□ 0.38
TNFRSF25Q93038 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFRSF25Q93038 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TNFRSF25Q93038 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
TNFRSF25Q93038 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TNFRSF25Q93038 AC023090.2-201ENST00000625182 2110 ntBASIC17.39■□□□□ 0.38
TNFRSF25Q93038 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TNFRSF25Q93038 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 ACTBP8-201ENST00000403258 1108 ntBASIC17.39■□□□□ 0.37
TNFRSF25Q93038 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 MIR5189-201ENST00000577370 114 ntBASIC17.39■□□□□ 0.37
TNFRSF25Q93038 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.39■□□□□ 0.37
TNFRSF25Q93038 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms