Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 WASH3P-207ENST00000560956 1394 ntBASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 FO538757.1-201ENST00000623083 1397 ntBASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CCNYL1Q8N7R7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 MKNK2P1-201ENST00000437526 628 ntBASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 ALG1L5P-201ENST00000482043 771 ntBASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCNYL1Q8N7R7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCNYL1Q8N7R7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms