Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH11P55287 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CDH11P55287 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CDH11P55287 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH11P55287 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH11P55287 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.24□□□□□ -0.13
CDH11P55287 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH11P55287 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH11P55287 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH11P55287 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CDH11P55287 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH11P55287 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CDH11P55287 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH11P55287 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CDH11P55287 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CDH11P55287 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 AC004987.2-201ENST00000395959 1148 ntBASIC14.23□□□□□ -0.13
CDH11P55287 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 AC142381.1-201ENST00000426099 345 ntBASIC14.23□□□□□ -0.13
CDH11P55287 AC055876.3-201ENST00000431496 288 ntBASIC14.23□□□□□ -0.13
CDH11P55287 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.23□□□□□ -0.13
CDH11P55287 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.23□□□□□ -0.13
CDH11P55287 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.23□□□□□ -0.13
CDH11P55287 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.23□□□□□ -0.13
CDH11P55287 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH11P55287 AC069120.2-201ENST00000524091 540 ntBASIC14.23□□□□□ -0.13
CDH11P55287 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.23□□□□□ -0.13
CDH11P55287 AC061975.2-201ENST00000581722 295 ntBASIC14.23□□□□□ -0.13
CDH11P55287 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH11P55287 AC138649.4-201ENST00000612222 287 ntBASIC14.23□□□□□ -0.13
CDH11P55287 AL390754.1-201ENST00000619088 582 ntBASIC14.23□□□□□ -0.13
CDH11P55287 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH11P55287 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CDH11P55287 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH11P55287 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CDH11P55287 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH11P55287 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CDH11P55287 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CDH11P55287 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH11P55287 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.23□□□□□ -0.13
CDH11P55287 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.23□□□□□ -0.13
CDH11P55287 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
CDH11P55287 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CDH11P55287 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.22□□□□□ -0.13
CDH11P55287 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 FO538757.1-201ENST00000623083 1397 ntBASIC14.22□□□□□ -0.13
CDH11P55287 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 AC007191.1-201ENST00000623179 2995 ntBASIC14.22□□□□□ -0.13
CDH11P55287 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDH11P55287 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH11P55287 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDH11P55287 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CDH11P55287 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.22□□□□□ -0.13
CDH11P55287 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CDH11P55287 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.22□□□□□ -0.13
CDH11P55287 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDH11P55287 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms