Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 TIA1-211ENST00000477044 904 ntTSL 57.57□□□□□ -1.23e-6■□□□□ 10.1
RPS3P23396 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.25□□□□□ -1.253e-6■□□□□ 10.1
RPS3P23396 EIF2AK1-208ENST00000474029 609 ntTSL 37.23□□□□□ -1.253e-6■□□□□ 10.1
RPS3P23396 RPL29-207ENST00000486565 574 ntTSL 1 (best)6.93□□□□□ -1.38e-19■□□□□ 10.1
RPS3P23396 EIF2AK1-210ENST00000495565 629 ntTSL 36.5□□□□□ -1.373e-6■□□□□ 10.1
RPS3P23396 NUSAP1-213ENST00000560898 708 ntTSL 36.37□□□□□ -1.393e-6■□□□□ 10.1
RPS3P23396 EIF2AK1-207ENST00000470168 595 ntTSL 1 (best)5.13□□□□□ -1.593e-6■□□□□ 10.1
RPS3P23396 KARS-208ENST00000566772 644 ntTSL 23.64□□□□□ -1.833e-6■□□□□ 10.1
RPS3P23396 XPO5-210ENST00000496341 800 ntTSL 52.53□□□□□ -23e-6■□□□□ 10.1
RPS3P23396 C20orf24-205ENST00000491113 734 ntTSL 225.46■■□□□ 1.674e-11■□□□□ 10.1
RPS3P23396 RPL30-207ENST00000520998 747 ntTSL 213.81□□□□□ -0.21e-22■□□□□ 10.1
RPS3P23396 RPL30-208ENST00000521112 573 ntTSL 1 (best)13.23□□□□□ -0.291e-22■□□□□ 10.1
RPS3P23396 CFI-203ENST00000504853 2368 ntTSL 26.2□□□□□ -1.424e-9■□□□□ 10.1
RPS3P23396 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.48□□□□□ -0.097e-16■□□□□ 10.1
RPS3P23396 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC11.21□□□□□ -0.617e-16■□□□□ 10.1
RPS3P23396 GAS5-224ENST00000454068 688 ntTSL 5 BASIC9.77□□□□□ -0.857e-16■□□□□ 10.1
RPS3P23396 GAS5-214ENST00000436656 822 ntTSL 39.21□□□□□ -0.947e-16■□□□□ 10.1
RPS3P23396 GAS5-216ENST00000443799 897 ntTSL 59.21□□□□□ -0.947e-16■□□□□ 10.1
RPS3P23396 GAS5-210ENST00000431268 1698 ntTSL 28.59□□□□□ -1.037e-16■□□□□ 10.1
RPS3P23396 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.92□□□□□ -1.147e-16■□□□□ 10.1
RPS3P23396 GAS5-220ENST00000449589 712 ntTSL 37.92□□□□□ -1.147e-16■□□□□ 10.1
RPS3P23396 GAS5-226ENST00000455838 632 ntTSL 27.92□□□□□ -1.147e-16■□□□□ 10.1
RPS3P23396 GAS5-203ENST00000416952 799 ntTSL 27.63□□□□□ -1.197e-16■□□□□ 10.1
RPS3P23396 GAS5-227ENST00000456293 583 ntTSL 37.04□□□□□ -1.287e-16■□□□□ 10.1
RPS3P23396 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.03□□□□□ -1.287e-16■□□□□ 10.1
RPS3P23396 GAS5-228ENST00000456812 723 ntTSL 36.68□□□□□ -1.347e-16■□□□□ 10.1
RPS3P23396 GAS5-206ENST00000422183 745 ntTSL 26.13□□□□□ -1.437e-16■□□□□ 10.1
RPS3P23396 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.74□□□□□ -1.497e-16■□□□□ 10.1
RPS3P23396 GAS5-201ENST00000412059 979 ntTSL 55.36□□□□□ -1.557e-16■□□□□ 10.1
RPS3P23396 GAS5-205ENST00000422008 497 ntTSL 34.76□□□□□ -1.657e-16■□□□□ 10.1
RPS3P23396 GAS5-215ENST00000442067 1114 ntTSL 24.57□□□□□ -1.687e-16■□□□□ 10.1
RPS3P23396 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.99□□□□□ -1.777e-16■□□□□ 10.1
RPS3P23396 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.98□□□□□ -1.777e-16■□□□□ 10.1
RPS3P23396 GAS5-213ENST00000436285 772 ntTSL 23.54□□□□□ -1.847e-16■□□□□ 10.1
RPS3P23396 GAS5-204ENST00000421068 1060 ntTSL 23.12□□□□□ -1.917e-16■□□□□ 10.1
RPS3P23396 GAS5-229ENST00000458220 469 ntTSL 23.05□□□□□ -1.927e-16■□□□□ 10.1
RPS3P23396 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.49□□□□□ -2.017e-16■□□□□ 10.1
RPS3P23396 CPNE1-227ENST00000498056 362 ntTSL 213.37□□□□□ -0.272e-8■□□□□ 10.1
RPS3P23396 PSMA7-204ENST00000442551 685 ntTSL 314.79□□□□□ -0.041e-9■□□□□ 10.1
RPS3P23396 PSMA7-206ENST00000486193 548 ntTSL 24.22□□□□□ -1.731e-9■□□□□ 10.1
RPS3P23396 C1RL-207ENST00000539927 354 ntTSL 218.49■□□□□ 0.552e-10■□□□□ 10.1
RPS3P23396 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.09■□□□□ 0.172e-10■□□□□ 10.1
RPS3P23396 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.61□□□□□ -0.072e-10■□□□□ 10.1
RPS3P23396 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.382e-10■□□□□ 10.1
RPS3P23396 C1RL-208ENST00000543933 592 ntTSL 510.91□□□□□ -0.662e-10■□□□□ 10.1
RPS3P23396 C1RL-209ENST00000543941 539 ntTSL 310.91□□□□□ -0.662e-10■□□□□ 10.1
RPS3P23396 C1RL-211ENST00000545280 449 ntTSL 3 BASIC9.68□□□□□ -0.862e-10■□□□□ 10.1
RPS3P23396 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.134e-6■□□□□ 10.1
RPS3P23396 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.314e-6■□□□□ 10.1
RPS3P23396 SEC31A-241ENST00000515749 829 ntTSL 27.47□□□□□ -1.212e-10■□□□□ 10.1
RPS3P23396 SEC31A-232ENST00000511338 657 ntTSL 52.22□□□□□ -2.052e-10■□□□□ 10.1
RPS3P23396 CTSA-206ENST00000480961 513 ntTSL 219.9■□□□□ 0.785e-9■□□□□ 10.1
RPS3P23396 CTSA-205ENST00000419493 606 ntTSL 29.36□□□□□ -0.915e-9■□□□□ 10.1
RPS3P23396 AKR1C2-209ENST00000604507 745 ntTSL 55.08□□□□□ -1.64e-6■□□□□ 10.1
RPS3P23396 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.87■■□□□ 1.733e-9■□□□□ 10.1
RPS3P23396 SP5-202ENST00000487037 257 ntTSL 316.89■□□□□ 0.293e-9■□□□□ 10.1
RPS3P23396 NAA50-204ENST00000478020 473 ntTSL 416.6■□□□□ 0.253e-9■□□□□ 10.1
RPS3P23396 NAA50-202ENST00000467022 520 ntTSL 416.44■□□□□ 0.223e-9■□□□□ 10.1
RPS3P23396 NAA50-205ENST00000481432 958 ntTSL 316.44■□□□□ 0.223e-9■□□□□ 10.1
RPS3P23396 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.183e-9■□□□□ 10.1
RPS3P23396 TTYH3-206ENST00000477439 731 ntTSL 215.8■□□□□ 0.122e-17■□□□□ 10.1
RPS3P23396 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.6□□□□□ -0.073e-9■□□□□ 10.1
RPS3P23396 NAA50-203ENST00000477813 1945 ntTSL 5 BASIC11.7□□□□□ -0.543e-9■□□□□ 10.1
RPS3P23396 XYLT2-204ENST00000509778 145 ntTSL 310.14□□□□□ -0.793e-9■□□□□ 10.1
RPS3P23396 NAA50-210ENST00000616174 3257 ntTSL 2 BASIC10.06□□□□□ -0.83e-9■□□□□ 10.1
RPS3P23396 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.092e-6■□□□□ 10.1
RPS3P23396 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.142e-6■□□□□ 10.1
RPS3P23396 LAPTM4A-202ENST00000483117 487 ntTSL 21.68□□□□□ -2.143e-9■□□□□ 10.1
RPS3P23396 ERBB3-214ENST00000550070 2729 ntTSL 1 (best)10□□□□□ -0.817e-7■□□□□ 10
RPS3P23396 CFI-206ENST00000515512 791 ntTSL 21.61□□□□□ -2.152e-18■□□□□ 10
RPS3P23396 ADGRG6-205ENST00000415128 1610 ntTSL 219.01■□□□□ 0.632e-18■□□□□ 10
RPS3P23396 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.81□□□□□ -0.362e-18■□□□□ 10
RPS3P23396 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.372e-18■□□□□ 10
RPS3P23396 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.872e-18■□□□□ 10
RPS3P23396 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC8.63□□□□□ -1.032e-18■□□□□ 10
RPS3P23396 DAP3-210ENST00000466384 373 ntTSL 21.54□□□□□ -2.162e-6■□□□□ 10
RPS3P23396 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.69□□□□□ -1.981e-10■□□□□ 10
RPS3P23396 PSME2-209ENST00000559453 1721 ntTSL 510.05□□□□□ -0.85e-7■□□□□ 10
RPS3P23396 RPS8-208ENST00000497035 694 ntTSL 314.53□□□□□ -0.081e-38■□□□□ 10
RPS3P23396 RPS8-204ENST00000470475 981 ntTSL 214.09□□□□□ -0.151e-38■□□□□ 10
RPS3P23396 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.342e-6■□□□□ 10
RPS3P23396 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.192e-6■□□□□ 10
RPS3P23396 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.32e-6■□□□□ 10
RPS3P23396 VBP1-202ENST00000460509 586 ntTSL 21.49□□□□□ -2.173e-6■□□□□ 10
RPS3P23396 CD164-205ENST00000415861 4963 ntTSL 1 (best)3.6□□□□□ -1.839e-7■□□□□ 10
RPS3P23396 RPLP1-204ENST00000488122 940 ntTSL 220.31■□□□□ 0.842e-21■□□□□ 10
RPS3P23396 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC12.87□□□□□ -0.352e-21■□□□□ 10
RPS3P23396 RPLP1-203ENST00000487304 1962 ntTSL 512.16□□□□□ -0.462e-21■□□□□ 10
RPS3P23396 RPLP1-201ENST00000260379 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.792e-21■□□□□ 10
RPS3P23396 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC7.84□□□□□ -1.152e-21■□□□□ 10
RPS3P23396 EIF2AK1-203ENST00000431744 806 ntTSL 325.42■■□□□ 1.665e-14■□□□□ 10
RPS3P23396 EIF2AK1-204ENST00000446699 573 ntTSL 425.42■■□□□ 1.665e-14■□□□□ 10
RPS3P23396 EIF2AK1-205ENST00000461493 631 ntTSL 219.89■□□□□ 0.775e-14■□□□□ 10
RPS3P23396 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.422e-12■□□□□ 10
RPS3P23396 FABP1-203ENST00000472846 546 ntTSL 26.29□□□□□ -1.45e-26■□□□□ 10
RPS3P23396 CSNK1A1-206ENST00000515748 620 ntTSL 2 BASIC9.16□□□□□ -0.942e-6■□□□□ 10
RPS3P23396 SREBF2-203ENST00000435061 770 ntTSL 316.63■□□□□ 0.252e-6■□□□□ 10
RPS3P23396 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.77□□□□□ -1.172e-8■□□□□ 10
RPS3P23396 PICALM-223ENST00000534412 811 ntTSL 55.6□□□□□ -1.512e-24■□□□□ 10
RPS3P23396 P3H1-211ENST00000472802 646 ntTSL 213.42□□□□□ -0.269e-7■□□□□ 10
Retrieved 100 of 24,271 protein–RNA pairs in 416 ms