RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.85
KARS-208ENST00000566772 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
KARS-208ENST00000566772 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
KARS-208ENST00000566772 POTEDQ86YR6 584 aa17.34■□□□□ 0.37
KARS-208ENST00000566772 PLPPR3Q6T4P5 718 aa16.87■□□□□ 0.29
KARS-208ENST00000566772 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
KARS-208ENST00000566772 ADRA2BP18089 450 aa15.9■□□□□ 0.14
KARS-208ENST00000566772 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
KARS-208ENST00000566772 FOXD1Q16676 465 aa15.76■□□□□ 0.11
KARS-208ENST00000566772 KCNA4P22459 653 aa15.74■□□□□ 0.11
KARS-208ENST00000566772 PPP6R1Q9UPN7 881 aa15.66■□□□□ 0.1
KARS-208ENST00000566772 MSH5O43196 834 aa15.46■□□□□ 0.07
KARS-208ENST00000566772 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
KARS-208ENST00000566772 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
KARS-208ENST00000566772 PPP4R3CPQ6ZMV5 832 aa15.04■□□□□ -0
KARS-208ENST00000566772 NCBP3Q53F19 620 aaKnown RBP14.84□□□□□ -0.03
KARS-208ENST00000566772 PIAS4Q8N2W9 510 aaPredicted RBP14.79□□□□□ -0.04
KARS-208ENST00000566772 NPM3O75607 178 aaKnown RBP14.69□□□□□ -0.06
KARS-208ENST00000566772 ZBTB22O15209 634 aa14.53□□□□□ -0.08
KARS-208ENST00000566772 CNKSR2Q8WXI2 1034 aa14.37□□□□□ -0.11
KARS-208ENST00000566772 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.13
KARS-208ENST00000566772 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
KARS-208ENST00000566772 SLC24A1O60721 1099 aa14.09□□□□□ -0.15
KARS-208ENST00000566772 CACNB1Q02641 598 aaPredicted RBP14.05□□□□□ -0.16
KARS-208ENST00000566772 RTN4Q9NQC3 1192 aaKnown RBP14.04□□□□□ -0.16
KARS-208ENST00000566772 DNAJC5BQ9UF47 199 aa14.03□□□□□ -0.16
KARS-208ENST00000566772 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
KARS-208ENST00000566772 AMER1Q5JTC6 1135 aaPredicted RBP13.94□□□□□ -0.18
KARS-208ENST00000566772 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
KARS-208ENST00000566772 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
KARS-208ENST00000566772 FKBP8Q14318 412 aa13.63□□□□□ -0.23
KARS-208ENST00000566772 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
KARS-208ENST00000566772 ATXN8OSP0DMR3 200 aa13.55□□□□□ -0.24
KARS-208ENST00000566772 DMRT2Q9Y5R5 561 aa13.51□□□□□ -0.25
KARS-208ENST00000566772 MYCNP04198 464 aaPredicted RBP13.5□□□□□ -0.25
KARS-208ENST00000566772 POTEHQ6S545 545 aa13.35□□□□□ -0.27
KARS-208ENST00000566772 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
KARS-208ENST00000566772 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
KARS-208ENST00000566772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.337e-7■□□□□ 9.1
KARS-208ENST00000566772 SAMD1Q6SPF0 538 aaPredicted RBP12.93□□□□□ -0.34
KARS-208ENST00000566772 DCAF8L1A6NGE4 600 aa12.92□□□□□ -0.34
KARS-208ENST00000566772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
KARS-208ENST00000566772 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
KARS-208ENST00000566772 PLCB2Q00722 1185 aa12.87□□□□□ -0.35
KARS-208ENST00000566772 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
KARS-208ENST00000566772 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
KARS-208ENST00000566772 ZNF219Q9P2Y4 722 aaPredicted RBP12.8□□□□□ -0.36
KARS-208ENST00000566772 C1QBPQ07021 282 aaKnown RBP12.77□□□□□ -0.37
KARS-208ENST00000566772 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
KARS-208ENST00000566772 HAP1P54257 671 aaPredicted RBP12.72□□□□□ -0.37
KARS-208ENST00000566772 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
KARS-208ENST00000566772 DCAF8L2P0C7V8 631 aa12.64□□□□□ -0.39
KARS-208ENST00000566772 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
KARS-208ENST00000566772 PROM2Q8N271 834 aa12.63□□□□□ -0.39
KARS-208ENST00000566772 IFNLR1Q8IU57 520 aaPredicted RBP12.61□□□□□ -0.39
KARS-208ENST00000566772 PRKCSHP14314 528 aaPredicted RBP12.58□□□□□ -0.4
KARS-208ENST00000566772 BCANQ96GW7 911 aa12.57□□□□□ -0.4
KARS-208ENST00000566772 APLP2Q06481 763 aa12.54□□□□□ -0.4
KARS-208ENST00000566772 PKD2Q13563 968 aa12.53□□□□□ -0.4
KARS-208ENST00000566772 VSIG10Q8N0Z9 540 aa12.5□□□□□ -0.41
KARS-208ENST00000566772 TAOK2Q9UL54 1235 aa12.47□□□□□ -0.41
KARS-208ENST00000566772 FBLN2P98095 1184 aa12.45□□□□□ -0.42
KARS-208ENST00000566772 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
KARS-208ENST00000566772 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
KARS-208ENST00000566772 POLA2Q14181 598 aa12.33□□□□□ -0.44
KARS-208ENST00000566772 BBXQ8WY36 941 aaPredicted RBP12.33□□□□□ -0.44
KARS-208ENST00000566772 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.32□□□□□ -0.44
KARS-208ENST00000566772 NPM1P06748 294 aaKnown RBP eCLIP12.31□□□□□ -0.44
KARS-208ENST00000566772 TPRNQ4KMQ1 711 aa12.3□□□□□ -0.44
KARS-208ENST00000566772 PAXIP1Q6ZW49 1069 aaPredicted RBP12.29□□□□□ -0.44
KARS-208ENST00000566772 SPINK5Q9NQ38 1064 aaPredicted RBP12.28□□□□□ -0.44
KARS-208ENST00000566772 ECM2O94769 699 aaPredicted RBP12.27□□□□□ -0.45
KARS-208ENST00000566772 SPOCK2Q92563 424 aa12.27□□□□□ -0.45
KARS-208ENST00000566772 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
KARS-208ENST00000566772 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
KARS-208ENST00000566772 RGL2O15211 777 aa12.15□□□□□ -0.46
KARS-208ENST00000566772 CAPN15O75808 1086 aa12.15□□□□□ -0.46
KARS-208ENST00000566772 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.46
KARS-208ENST00000566772 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
KARS-208ENST00000566772 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
KARS-208ENST00000566772 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
KARS-208ENST00000566772 PLCD3Q8N3E9 789 aa12.06□□□□□ -0.48
KARS-208ENST00000566772 ABCB7O75027 752 aa12.03□□□□□ -0.48
KARS-208ENST00000566772 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
KARS-208ENST00000566772 CHGAP10645 457 aaKnown RBP12□□□□□ -0.49
KARS-208ENST00000566772 MIER1Q8N108 512 aa12□□□□□ -0.49
KARS-208ENST00000566772 CIZ1Q9ULV3 898 aaPredicted RBP11.95□□□□□ -0.5
KARS-208ENST00000566772 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
KARS-208ENST00000566772 NBR1Q14596 966 aa11.9□□□□□ -0.5
KARS-208ENST00000566772 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
KARS-208ENST00000566772 PABPN1Q86U42 306 aaKnown RBP eCLIP11.89□□□□□ -0.51
KARS-208ENST00000566772 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
KARS-208ENST00000566772 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
KARS-208ENST00000566772 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
KARS-208ENST00000566772 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
KARS-208ENST00000566772 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
KARS-208ENST00000566772 HS6ST3Q8IZP7 471 aa11.82□□□□□ -0.52
KARS-208ENST00000566772 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
KARS-208ENST00000566772 PLEKHG5O94827 1062 aa11.77□□□□□ -0.53
KARS-208ENST00000566772 TRIM41Q8WV44 630 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms