RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
CSNK1A1-206ENST00000515748 ABCC9O60706 1549 aa22.14■■□□□ 1.13
CSNK1A1-206ENST00000515748 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.08
CSNK1A1-206ENST00000515748 CCDC180Q9P1Z9 1646 aa21.03■□□□□ 0.96
CSNK1A1-206ENST00000515748 DNAJC5Q9H3Z4 198 aa20.67■□□□□ 0.9
CSNK1A1-206ENST00000515748 PABPN1Q86U42 306 aaKnown RBP eCLIP20.59■□□□□ 0.89
CSNK1A1-206ENST00000515748 RB1CC1Q8TDY2 1594 aa20.57■□□□□ 0.88
CSNK1A1-206ENST00000515748 NACADO15069 1562 aa20.21■□□□□ 0.83
CSNK1A1-206ENST00000515748 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
CSNK1A1-206ENST00000515748 CECR2Q9BXF3 1484 aa20.04■□□□□ 0.8
CSNK1A1-206ENST00000515748 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
CSNK1A1-206ENST00000515748 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
CSNK1A1-206ENST00000515748 CC2D2AQ9P2K1 1620 aa19.88■□□□□ 0.77
CSNK1A1-206ENST00000515748 MYO15BQ96JP2 1530 aa19.62■□□□□ 0.73
CSNK1A1-206ENST00000515748 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
CSNK1A1-206ENST00000515748 EIF4G1Q04637 1599 aaKnown RBP19.6■□□□□ 0.73
CSNK1A1-206ENST00000515748 CUX2O14529 1486 aa19.42■□□□□ 0.7
CSNK1A1-206ENST00000515748 TRIM41Q8WV44 630 aa19.35■□□□□ 0.69
CSNK1A1-206ENST00000515748 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
CSNK1A1-206ENST00000515748 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
CSNK1A1-206ENST00000515748 DCAF1Q9Y4B6 1507 aa19.02■□□□□ 0.64
CSNK1A1-206ENST00000515748 ZCCHC6Q5VYS8 1495 aaKnown RBP18.93■□□□□ 0.62
CSNK1A1-206ENST00000515748 NCAPD3P42695 1498 aa18.76■□□□□ 0.59
CSNK1A1-206ENST00000515748 NESP48681 1621 aa18.74■□□□□ 0.59
CSNK1A1-206ENST00000515748 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
CSNK1A1-206ENST00000515748 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
CSNK1A1-206ENST00000515748 ATAD2BQ9ULI0 1458 aa18.54■□□□□ 0.56
CSNK1A1-206ENST00000515748 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
CSNK1A1-206ENST00000515748 AEBP2Q6ZN18 517 aaPredicted RBP18.45■□□□□ 0.54
CSNK1A1-206ENST00000515748 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
CSNK1A1-206ENST00000515748 HMGXB3Q12766 1538 aa18.41■□□□□ 0.54
CSNK1A1-206ENST00000515748 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
CSNK1A1-206ENST00000515748 KIF21AQ7Z4S6 1674 aa18.33■□□□□ 0.52
CSNK1A1-206ENST00000515748 BAZ1AQ9NRL2 1556 aaPredicted RBP18.33■□□□□ 0.52
CSNK1A1-206ENST00000515748 TRHP20396 242 aaPredicted RBP18.29■□□□□ 0.52
CSNK1A1-206ENST00000515748 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
CSNK1A1-206ENST00000515748 MRC2Q9UBG0 1479 aa18.25■□□□□ 0.51
CSNK1A1-206ENST00000515748 RIMBP3CA6NJZ7 1639 aa18.21■□□□□ 0.51
CSNK1A1-206ENST00000515748 RIMBP3BA6NNM3 1639 aa18.21■□□□□ 0.51
CSNK1A1-206ENST00000515748 RIMBP3Q9UFD9 1639 aa18.21■□□□□ 0.51
CSNK1A1-206ENST00000515748 WDR62O43379 1518 aa18.19■□□□□ 0.5
CSNK1A1-206ENST00000515748 CYB5RLQ6IPT4 315 aa18.19■□□□□ 0.5
CSNK1A1-206ENST00000515748 SMARCA4P51532 1647 aa18.19■□□□□ 0.5
CSNK1A1-206ENST00000515748 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
CSNK1A1-206ENST00000515748 ARHGEF11O15085 1522 aa18.08■□□□□ 0.49
CSNK1A1-206ENST00000515748 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
CSNK1A1-206ENST00000515748 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
CSNK1A1-206ENST00000515748 FANCD2Q9BXW9 1451 aa17.91■□□□□ 0.46
CSNK1A1-206ENST00000515748 ARAP1Q96P48 1450 aa17.85■□□□□ 0.45
CSNK1A1-206ENST00000515748 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
CSNK1A1-206ENST00000515748 ILDR1Q86SU0 546 aaPredicted RBP17.82■□□□□ 0.44
CSNK1A1-206ENST00000515748 URB2Q14146 1524 aaKnown RBP17.81■□□□□ 0.44
CSNK1A1-206ENST00000515748 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.44
CSNK1A1-206ENST00000515748 CFTRP13569 1480 aa17.71■□□□□ 0.43
CSNK1A1-206ENST00000515748 FBLN2P98095 1184 aa17.69■□□□□ 0.42
CSNK1A1-206ENST00000515748 RSF1Q96T23 1441 aaPredicted RBP17.69■□□□□ 0.42
CSNK1A1-206ENST00000515748 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
CSNK1A1-206ENST00000515748 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.43e-10■■■■□ 24.7
CSNK1A1-206ENST00000515748 CHD1O14646 1710 aa17.52■□□□□ 0.4
CSNK1A1-206ENST00000515748 WIZO95785 1651 aa17.52■□□□□ 0.4
CSNK1A1-206ENST00000515748 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
CSNK1A1-206ENST00000515748 TOPBP1Q92547 1522 aa17.45■□□□□ 0.38
CSNK1A1-206ENST00000515748 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.37
CSNK1A1-206ENST00000515748 KDM4FA0A1W2PPD8 638 aa17.38■□□□□ 0.37
CSNK1A1-206ENST00000515748 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
CSNK1A1-206ENST00000515748 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
CSNK1A1-206ENST00000515748 GAPVD1Q14C86 1478 aa17.34■□□□□ 0.37
CSNK1A1-206ENST00000515748 TARBP1Q13395 1621 aaKnown RBP17.32■□□□□ 0.36
CSNK1A1-206ENST00000515748 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
CSNK1A1-206ENST00000515748 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
CSNK1A1-206ENST00000515748 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
CSNK1A1-206ENST00000515748 DNMBPQ6XZF7 1577 aa17.24■□□□□ 0.35
CSNK1A1-206ENST00000515748 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
CSNK1A1-206ENST00000515748 PRDM2Q13029 1718 aa17.22■□□□□ 0.35
CSNK1A1-206ENST00000515748 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
CSNK1A1-206ENST00000515748 SOGA1O94964 1423 aa17.21■□□□□ 0.34
CSNK1A1-206ENST00000515748 POLA1P09884 1462 aaPredicted RBP17.2■□□□□ 0.34
CSNK1A1-206ENST00000515748 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
CSNK1A1-206ENST00000515748 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
CSNK1A1-206ENST00000515748 SYNJ2O15056 1496 aa17.13■□□□□ 0.33
CSNK1A1-206ENST00000515748 FAM69CQ0P6D2 419 aa17.13■□□□□ 0.33
CSNK1A1-206ENST00000515748 GRIN2BQ13224 1484 aa17.09■□□□□ 0.33
CSNK1A1-206ENST00000515748 ERCC6L2Q5T890 1561 aa17.07■□□□□ 0.32
CSNK1A1-206ENST00000515748 KIF13AQ9H1H9 1805 aa17.07■□□□□ 0.32
CSNK1A1-206ENST00000515748 FBXO41Q8TF61 875 aa17.05■□□□□ 0.32
CSNK1A1-206ENST00000515748 WDR97A6NE52 1622 aa17.02■□□□□ 0.31
CSNK1A1-206ENST00000515748 ABCC10Q5T3U5 1492 aa16.99■□□□□ 0.31
CSNK1A1-206ENST00000515748 NPM1P06748 294 aaKnown RBP eCLIP16.97■□□□□ 0.31
CSNK1A1-206ENST00000515748 FGD5Q6ZNL6 1462 aa16.96■□□□□ 0.31
CSNK1A1-206ENST00000515748 KDM6BO15054 1643 aa16.93■□□□□ 0.3
CSNK1A1-206ENST00000515748 CEP170Q5SW79 1584 aa16.93■□□□□ 0.3
CSNK1A1-206ENST00000515748 HECW2Q9P2P5 1572 aa16.9■□□□□ 0.3
CSNK1A1-206ENST00000515748 ADGRL1O94910 1474 aa16.87■□□□□ 0.29
CSNK1A1-206ENST00000515748 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
CSNK1A1-206ENST00000515748 NUP160Q12769 1436 aa16.84■□□□□ 0.29
CSNK1A1-206ENST00000515748 JPH4Q96JJ6 628 aa16.82■□□□□ 0.28
CSNK1A1-206ENST00000515748 DIP2BQ9P265 1576 aa16.81■□□□□ 0.28
CSNK1A1-206ENST00000515748 LMTK3Q96Q04 1460 aa16.81■□□□□ 0.28
CSNK1A1-206ENST00000515748 PRG4Q92954 1404 aaPredicted RBP16.81■□□□□ 0.28
CSNK1A1-206ENST00000515748 PBRM1Q86U86 1689 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms