Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL645939.2-201ENST00000427340 991 ntBASIC15.13■□□□□ 0.01
PCNAP12004 RN7SL618P-201ENST00000477850 296 ntBASIC15.13■□□□□ 0.01
PCNAP12004 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.13■□□□□ 0.01
PCNAP12004 IGHV3-42-201ENST00000520410 361 ntBASIC15.13■□□□□ 0.01
PCNAP12004 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.13■□□□□ 0.01
PCNAP12004 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.13■□□□□ 0.01
PCNAP12004 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCNAP12004 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.13■□□□□ 0.01
PCNAP12004 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.13■□□□□ 0.01
PCNAP12004 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCNAP12004 AC140878.1-201ENST00000565277 250 ntBASIC15.13■□□□□ 0.01
PCNAP12004 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.13■□□□□ 0.01
PCNAP12004 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.13■□□□□ 0.01
PCNAP12004 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCNAP12004 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCNAP12004 AC026748.1-201ENST00000624349 3251 ntBASIC15.13■□□□□ 0.01
PCNAP12004 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCNAP12004 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.13■□□□□ 0.01
PCNAP12004 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCNAP12004 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCNAP12004 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCNAP12004 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCNAP12004 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCNAP12004 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.13■□□□□ 0.01
PCNAP12004 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCNAP12004 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.12■□□□□ 0.01
PCNAP12004 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.12■□□□□ 0.01
PCNAP12004 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.12■□□□□ 0.01
PCNAP12004 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PCNAP12004 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCNAP12004 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCNAP12004 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 AC139749.1-202ENST00000617529 3139 ntBASIC15.12■□□□□ 0.01
PCNAP12004 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PCNAP12004 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.12■□□□□ 0.01
PCNAP12004 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 TREML5P-201ENST00000421694 576 ntBASIC15.12■□□□□ 0.01
PCNAP12004 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCNAP12004 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.12■□□□□ 0.01
PCNAP12004 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.12■□□□□ 0.01
PCNAP12004 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.12■□□□□ 0.01
PCNAP12004 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.12■□□□□ 0.01
PCNAP12004 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 AC112693.3-201ENST00000624819 1983 ntBASIC15.12■□□□□ 0.01
PCNAP12004 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCNAP12004 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.12■□□□□ 0.01
PCNAP12004 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PCNAP12004 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCNAP12004 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.12■□□□□ 0.01
PCNAP12004 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
PCNAP12004 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCNAP12004 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCNAP12004 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCNAP12004 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCNAP12004 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCNAP12004 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
PCNAP12004 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.11■□□□□ 0.01
PCNAP12004 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.11■□□□□ 0.01
PCNAP12004 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PCNAP12004 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
PCNAP12004 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCNAP12004 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PCNAP12004 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCNAP12004 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.11■□□□□ 0.01
PCNAP12004 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCNAP12004 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.11■□□□□ 0.01
PCNAP12004 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms