Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 ABR-203ENST00000536794 2213 ntTSL 2 BASIC6.7□□□□□ -1.34
USH2AO75445 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC6.7□□□□□ -1.34
USH2AO75445 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USH2AO75445 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 AP002414.2-201ENST00000591780 3365 ntBASIC6.69□□□□□ -1.34
USH2AO75445 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 SLC9A7P1-202ENST00000556476 2239 ntBASIC6.69□□□□□ -1.34
USH2AO75445 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC6.69□□□□□ -1.34
USH2AO75445 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC6.69□□□□□ -1.34
USH2AO75445 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC6.69□□□□□ -1.34
USH2AO75445 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 BANF1P3-201ENST00000412556 261 ntBASIC6.69□□□□□ -1.34
USH2AO75445 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 AC068880.1-201ENST00000507289 2297 ntBASIC6.69□□□□□ -1.34
USH2AO75445 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
USH2AO75445 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 FTH1P22-201ENST00000456305 520 ntBASIC6.69□□□□□ -1.34
USH2AO75445 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC6.69□□□□□ -1.34
USH2AO75445 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC6.69□□□□□ -1.34
USH2AO75445 AP002490.2-201ENST00000524791 560 ntBASIC6.69□□□□□ -1.34
USH2AO75445 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC6.69□□□□□ -1.34
USH2AO75445 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 AC007326.1-201ENST00000604539 458 ntBASIC6.69□□□□□ -1.34
USH2AO75445 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
USH2AO75445 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC6.69□□□□□ -1.34
USH2AO75445 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 AC007292.2-201ENST00000593524 1812 ntBASIC6.69□□□□□ -1.34
USH2AO75445 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC6.69□□□□□ -1.34
USH2AO75445 DKKL1P1-201ENST00000400550 698 ntBASIC6.69□□□□□ -1.34
USH2AO75445 AC080013.5-201ENST00000607044 679 ntBASIC6.69□□□□□ -1.34
USH2AO75445 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
USH2AO75445 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC6.69□□□□□ -1.34
USH2AO75445 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
USH2AO75445 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USH2AO75445 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
USH2AO75445 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
USH2AO75445 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC6.68□□□□□ -1.34
USH2AO75445 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC6.68□□□□□ -1.34
USH2AO75445 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
USH2AO75445 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC6.68□□□□□ -1.34
USH2AO75445 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms