Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AC005498.2-205ENST00000593218 784 ntBASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AC008738.7-201ENST00000609744 511 ntBASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AC004840.1-201ENST00000636359 365 ntBASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AC068587.6-202ENST00000641839 5619 ntBASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 AC126365.1-201ENST00000578585 1514 ntBASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NHLRC1Q6VVB1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 AC138969.3-201ENST00000546612 1459 ntBASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 AC138932.2-201ENST00000548268 1459 ntBASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 AC126755.4-201ENST00000549796 1459 ntBASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 AL133267.1-201ENST00000398220 340 ntBASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 RPL5P21-201ENST00000404620 815 ntBASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NHLRC1Q6VVB1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms