Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LINC00242Q5T6M2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 AC018529.2-202ENST00000611482 3087 ntBASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 TFAMP1-201ENST00000412727 736 ntBASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 PENK-208ENST00000523051 772 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 AP001005.1-201ENST00000571755 1248 ntBASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
LINC00242Q5T6M2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 AC136759.1-202ENST00000530858 2194 ntBASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00242Q5T6M2 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms