Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB5BP61020 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
RAB5BP61020 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
RAB5BP61020 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB5BP61020 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB5BP61020 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
RAB5BP61020 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB5BP61020 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 SLC25A1P2-201ENST00000430693 912 ntBASIC12.11□□□□□ -0.47
RAB5BP61020 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB5BP61020 AF186192.3-201ENST00000583427 947 ntBASIC12.11□□□□□ -0.47
RAB5BP61020 AC008403.3-201ENST00000598924 454 ntBASIC12.11□□□□□ -0.47
RAB5BP61020 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB5BP61020 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
RAB5BP61020 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.11□□□□□ -0.47
RAB5BP61020 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
RAB5BP61020 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.11□□□□□ -0.47
RAB5BP61020 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
RAB5BP61020 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.11□□□□□ -0.47
RAB5BP61020 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
RAB5BP61020 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RAB5BP61020 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB5BP61020 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RAB5BP61020 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
RAB5BP61020 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RAB5BP61020 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RAB5BP61020 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.1□□□□□ -0.47
RAB5BP61020 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB5BP61020 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RAB5BP61020 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 AP002761.4-201ENST00000565433 3361 ntBASIC12.1□□□□□ -0.47
RAB5BP61020 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.1□□□□□ -0.47
RAB5BP61020 HAUS4P1-201ENST00000406739 1145 ntBASIC12.1□□□□□ -0.47
RAB5BP61020 UBE2SP1-201ENST00000450587 669 ntBASIC12.1□□□□□ -0.47
RAB5BP61020 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB5BP61020 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.1□□□□□ -0.47
RAB5BP61020 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
RAB5BP61020 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB5BP61020 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB5BP61020 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
RAB5BP61020 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB5BP61020 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RAB5BP61020 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
RAB5BP61020 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
RAB5BP61020 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
RAB5BP61020 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms