Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CKS2P33552 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CKS2P33552 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.44□□□□□ -0.58
CKS2P33552 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.44□□□□□ -0.58
CKS2P33552 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.44□□□□□ -0.58
CKS2P33552 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.44□□□□□ -0.58
CKS2P33552 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS2P33552 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.44□□□□□ -0.58
CKS2P33552 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS2P33552 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.44□□□□□ -0.58
CKS2P33552 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CKS2P33552 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.44□□□□□ -0.58
CKS2P33552 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.44□□□□□ -0.58
CKS2P33552 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 AC138894.3-201ENST00000603787 634 ntBASIC11.44□□□□□ -0.58
CKS2P33552 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS2P33552 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
CKS2P33552 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS2P33552 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
CKS2P33552 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.43□□□□□ -0.58
CKS2P33552 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CKS2P33552 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.43□□□□□ -0.58
CKS2P33552 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.43□□□□□ -0.58
CKS2P33552 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.43□□□□□ -0.58
CKS2P33552 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CKS2P33552 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 PMS2P7-201ENST00000506558 1336 ntBASIC11.43□□□□□ -0.58
CKS2P33552 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.43□□□□□ -0.58
CKS2P33552 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.43□□□□□ -0.58
CKS2P33552 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.43□□□□□ -0.58
CKS2P33552 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CKS2P33552 HMGA1P7-201ENST00000406908 502 ntBASIC11.43□□□□□ -0.58
CKS2P33552 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
CKS2P33552 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.43□□□□□ -0.58
CKS2P33552 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
CKS2P33552 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.43□□□□□ -0.58
CKS2P33552 KRT18P31-201ENST00000506277 1292 ntBASIC11.43□□□□□ -0.58
CKS2P33552 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.43□□□□□ -0.58
CKS2P33552 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.43□□□□□ -0.58
CKS2P33552 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.43□□□□□ -0.58
CKS2P33552 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.43□□□□□ -0.58
CKS2P33552 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.43□□□□□ -0.58
CKS2P33552 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.43□□□□□ -0.58
CKS2P33552 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
CKS2P33552 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CKS2P33552 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms