Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.78□□□□□ -0.2
PFDN1O60925 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.78□□□□□ -0.2
PFDN1O60925 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PFDN1O60925 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
PFDN1O60925 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.78□□□□□ -0.2
PFDN1O60925 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.78□□□□□ -0.2
PFDN1O60925 MFAP1P1-201ENST00000442257 1255 ntBASIC13.78□□□□□ -0.2
PFDN1O60925 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
PFDN1O60925 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.78□□□□□ -0.2
PFDN1O60925 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.78□□□□□ -0.2
PFDN1O60925 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.78□□□□□ -0.2
PFDN1O60925 WWOX-216ENST00000569818 525 ntBASIC13.78□□□□□ -0.2
PFDN1O60925 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.78□□□□□ -0.2
PFDN1O60925 CR769767.2-201ENST00000622735 460 ntBASIC13.78□□□□□ -0.2
PFDN1O60925 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 AC012531.1-201ENST00000562848 2680 ntBASIC13.78□□□□□ -0.2
PFDN1O60925 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 AC096733.2-201ENST00000609937 1394 ntBASIC13.78□□□□□ -0.2
PFDN1O60925 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.78□□□□□ -0.2
PFDN1O60925 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.78□□□□□ -0.2
PFDN1O60925 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.78□□□□□ -0.2
PFDN1O60925 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PFDN1O60925 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.78□□□□□ -0.2
PFDN1O60925 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PFDN1O60925 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PFDN1O60925 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PFDN1O60925 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.78□□□□□ -0.2
PFDN1O60925 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PFDN1O60925 AC018442.1-201ENST00000421439 2061 ntBASIC13.78□□□□□ -0.2
PFDN1O60925 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.78□□□□□ -0.2
PFDN1O60925 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PFDN1O60925 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PFDN1O60925 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.77□□□□□ -0.2
PFDN1O60925 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
PFDN1O60925 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PFDN1O60925 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC13.77□□□□□ -0.2
PFDN1O60925 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC13.77□□□□□ -0.2
PFDN1O60925 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PFDN1O60925 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.77□□□□□ -0.21
PFDN1O60925 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.77□□□□□ -0.21
PFDN1O60925 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.77□□□□□ -0.21
PFDN1O60925 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.77□□□□□ -0.21
PFDN1O60925 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.77□□□□□ -0.21
PFDN1O60925 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.77□□□□□ -0.21
PFDN1O60925 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
PFDN1O60925 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.77□□□□□ -0.21
PFDN1O60925 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.77□□□□□ -0.21
PFDN1O60925 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.77□□□□□ -0.21
PFDN1O60925 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PFDN1O60925 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.77□□□□□ -0.21
PFDN1O60925 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 FSCN1P1-201ENST00000568912 1481 ntBASIC13.77□□□□□ -0.21
PFDN1O60925 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PFDN1O60925 MTDHP1-201ENST00000605323 784 ntBASIC13.77□□□□□ -0.21
PFDN1O60925 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.77□□□□□ -0.21
PFDN1O60925 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
PFDN1O60925 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC13.77□□□□□ -0.21
PFDN1O60925 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PFDN1O60925 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PFDN1O60925 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms