RNA–Protein interactions for RNA: ENST00000600252.5

SYDE1-203, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 2 BASIC

Gene SYDE1, Length 3,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-203ENST00000600252 NISCHQ9Y2I1 1504 aa26.28■■□□□ 1.8
SYDE1-203ENST00000600252 DCAF8L2P0C7V8 631 aa23.8■■□□□ 1.4
SYDE1-203ENST00000600252 SHROOM4Q9ULL8 1493 aa22.82■■□□□ 1.24
SYDE1-203ENST00000600252 ABCC9O60706 1549 aa22.5■■□□□ 1.19
SYDE1-203ENST00000600252 CCDC180Q9P1Z9 1646 aa22.37■■□□□ 1.17
SYDE1-203ENST00000600252 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
SYDE1-203ENST00000600252 ZCCHC6Q5VYS8 1495 aaKnown RBP21.89■■□□□ 1.09
SYDE1-203ENST00000600252 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
SYDE1-203ENST00000600252 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
SYDE1-203ENST00000600252 RB1CC1Q8TDY2 1594 aa21.28■■□□□ 1
SYDE1-203ENST00000600252 NACADO15069 1562 aa21.26■□□□□ 0.99
SYDE1-203ENST00000600252 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
SYDE1-203ENST00000600252 PELP1Q8IZL8 1130 aaKnown RBP20.95■□□□□ 0.94
SYDE1-203ENST00000600252 MYO15BQ96JP2 1530 aa20.87■□□□□ 0.93
SYDE1-203ENST00000600252 EHMT2Q96KQ7 1210 aa20.87■□□□□ 0.93
SYDE1-203ENST00000600252 FAM9AQ8IZU1 332 aaPredicted RBP20.73■□□□□ 0.91
SYDE1-203ENST00000600252 CECR2Q9BXF3 1484 aa20.71■□□□□ 0.91
SYDE1-203ENST00000600252 TRIM41Q8WV44 630 aa20.64■□□□□ 0.89
SYDE1-203ENST00000600252 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
SYDE1-203ENST00000600252 MYT1Q01538 1121 aa20.52■□□□□ 0.88
SYDE1-203ENST00000600252 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
SYDE1-203ENST00000600252 MROH2BQ7Z745 1585 aa20.43■□□□□ 0.86
SYDE1-203ENST00000600252 BAZ1AQ9NRL2 1556 aaPredicted RBP20.37■□□□□ 0.85
SYDE1-203ENST00000600252 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
SYDE1-203ENST00000600252 RANGAP1P46060 587 aaPredicted RBP20.21■□□□□ 0.83
SYDE1-203ENST00000600252 BICRAQ9NZM4 1560 aa20.2■□□□□ 0.82
SYDE1-203ENST00000600252 WIZO95785 1651 aa20.2■□□□□ 0.82
SYDE1-203ENST00000600252 UNC13AQ9UPW8 1703 aa20.15■□□□□ 0.82
SYDE1-203ENST00000600252 LOC105371045A0A1W2PR82 267 aa20.13■□□□□ 0.81
SYDE1-203ENST00000600252 SMARCA4P51532 1647 aa20.11■□□□□ 0.81
SYDE1-203ENST00000600252 UBTFP17480 764 aaKnown RBP20.05■□□□□ 0.8
SYDE1-203ENST00000600252 ATAD2BQ9ULI0 1458 aa20.03■□□□□ 0.8
SYDE1-203ENST00000600252 EIF4G1Q04637 1599 aaKnown RBP19.97■□□□□ 0.79
SYDE1-203ENST00000600252 SMARCA2P51531 1590 aa19.97■□□□□ 0.79
SYDE1-203ENST00000600252 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
SYDE1-203ENST00000600252 TTBK1Q5TCY1 1321 aaPredicted RBP19.91■□□□□ 0.78
SYDE1-203ENST00000600252 TOP2AP11388 1531 aaKnown RBP19.88■□□□□ 0.77
SYDE1-203ENST00000600252 HRCP23327 699 aa19.83■□□□□ 0.76
SYDE1-203ENST00000600252 DNAJC5BQ9UF47 199 aa19.8■□□□□ 0.76
SYDE1-203ENST00000600252 PPARGC1BQ86YN6 1023 aaKnown RBP19.76■□□□□ 0.75
SYDE1-203ENST00000600252 CC2D2AQ9P2K1 1620 aa19.74■□□□□ 0.75
SYDE1-203ENST00000600252 PCGF6Q9BYE7 350 aa19.73■□□□□ 0.75
SYDE1-203ENST00000600252 NCAPD3P42695 1498 aa19.72■□□□□ 0.75
SYDE1-203ENST00000600252 ATP1B4Q9UN42 357 aaPredicted RBP19.71■□□□□ 0.75
SYDE1-203ENST00000600252 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
SYDE1-203ENST00000600252 APLP2Q06481 763 aa19.67■□□□□ 0.74
SYDE1-203ENST00000600252 ABCC8Q09428 1581 aa19.67■□□□□ 0.74
SYDE1-203ENST00000600252 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
SYDE1-203ENST00000600252 CADPSQ9ULU8 1353 aa19.61■□□□□ 0.73
SYDE1-203ENST00000600252 FBLN2P98095 1184 aa19.6■□□□□ 0.73
SYDE1-203ENST00000600252 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
SYDE1-203ENST00000600252 NESP48681 1621 aa19.46■□□□□ 0.71
SYDE1-203ENST00000600252 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
SYDE1-203ENST00000600252 SOGA1O94964 1423 aa19.44■□□□□ 0.7
SYDE1-203ENST00000600252 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
SYDE1-203ENST00000600252 PEG3Q9GZU2 1588 aa19.4■□□□□ 0.7
SYDE1-203ENST00000600252 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
SYDE1-203ENST00000600252 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
SYDE1-203ENST00000600252 CFTRP13569 1480 aa19.31■□□□□ 0.68
SYDE1-203ENST00000600252 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
SYDE1-203ENST00000600252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
SYDE1-203ENST00000600252 HNRNPUL2Q1KMD3 747 aaKnown RBP19.29■□□□□ 0.68
SYDE1-203ENST00000600252 CUX2O14529 1486 aa19.28■□□□□ 0.68
SYDE1-203ENST00000600252 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
SYDE1-203ENST00000600252 TDRD9Q8NDG6 1382 aaKnown RBP19.27■□□□□ 0.68
SYDE1-203ENST00000600252 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
SYDE1-203ENST00000600252 RUSC2Q8N2Y8 1516 aa19.24■□□□□ 0.67
SYDE1-203ENST00000600252 ARID3CA6NKF2 412 aa19.21■□□□□ 0.67
SYDE1-203ENST00000600252 CHMP7Q8WUX9 453 aaPredicted RBP19.2■□□□□ 0.66
SYDE1-203ENST00000600252 EEA1Q15075 1411 aa19.17■□□□□ 0.66
SYDE1-203ENST00000600252 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
SYDE1-203ENST00000600252 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
SYDE1-203ENST00000600252 FGD5Q6ZNL6 1462 aa19.12■□□□□ 0.65
SYDE1-203ENST00000600252 CENPBP07199 599 aaPredicted RBP19.12■□□□□ 0.65
SYDE1-203ENST00000600252 ITGAEP38570 1179 aa19.1■□□□□ 0.65
SYDE1-203ENST00000600252 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
SYDE1-203ENST00000600252 GOLGA3Q08378 1498 aa19.09■□□□□ 0.65
SYDE1-203ENST00000600252 TRIM26Q12899 539 aaPredicted RBP19.05■□□□□ 0.64
SYDE1-203ENST00000600252 CUX1P39880 1505 aa19.05■□□□□ 0.64
SYDE1-203ENST00000600252 CLIP1P30622 1438 aa19.02■□□□□ 0.64
SYDE1-203ENST00000600252 CEP162Q5TB80 1403 aa19.02■□□□□ 0.63
SYDE1-203ENST00000600252 LAMC3Q9Y6N6 1575 aa18.99■□□□□ 0.63
SYDE1-203ENST00000600252 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
SYDE1-203ENST00000600252 GTF3C3Q9Y5Q9 886 aa18.98■□□□□ 0.63
SYDE1-203ENST00000600252 TNIKQ9UKE5 1360 aa18.97■□□□□ 0.63
SYDE1-203ENST00000600252 RAPGEF2Q9Y4G8 1499 aa18.95■□□□□ 0.62
SYDE1-203ENST00000600252 AQRO60306 1485 aaKnown RBP eCLIP18.94■□□□□ 0.62
SYDE1-203ENST00000600252 POLA1P09884 1462 aaPredicted RBP18.92■□□□□ 0.62
SYDE1-203ENST00000600252 BCL11AQ9H165 835 aa18.92■□□□□ 0.62
SYDE1-203ENST00000600252 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
SYDE1-203ENST00000600252 MRC2Q9UBG0 1479 aa18.91■□□□□ 0.62
SYDE1-203ENST00000600252 IGF1RP08069 1367 aa18.91■□□□□ 0.62
SYDE1-203ENST00000600252 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
SYDE1-203ENST00000600252 GAPVD1Q14C86 1478 aa18.86■□□□□ 0.61
SYDE1-203ENST00000600252 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
SYDE1-203ENST00000600252 FAM50AQ14320 339 aaKnown RBP18.85■□□□□ 0.61
SYDE1-203ENST00000600252 DNMBPQ6XZF7 1577 aa18.83■□□□□ 0.61
SYDE1-203ENST00000600252 YTHDC1Q96MU7 727 aaKnown RBP18.81■□□□□ 0.6
SYDE1-203ENST00000600252 ERICH6Q7L0X2 663 aa18.81■□□□□ 0.6
SYDE1-203ENST00000600252 ACIN1Q9UKV3 1341 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms