Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GOLGA6L4A6NEF3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
GOLGA6L4A6NEF3 AC015656.1-201ENST00000624209 3578 ntBASIC17.95■□□□□ 0.46
GOLGA6L4A6NEF3 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
GOLGA6L4A6NEF3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
GOLGA6L4A6NEF3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GOLGA6L4A6NEF3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 AC079140.1-201ENST00000508039 487 ntBASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 AC140113.2-201ENST00000604370 208 ntBASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 AP3S2-216ENST00000617003 1561 ntBASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GOLGA6L4A6NEF3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 AC136604.1-201ENST00000418535 575 ntBASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 FAM197Y3-203ENST00000618346 717 ntBASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 AC139749.1-202ENST00000617529 3139 ntBASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
GOLGA6L4A6NEF3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 CICP11-201ENST00000434745 2827 ntBASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 AZGP1P1-201ENST00000411909 902 ntBASIC17.92■□□□□ 0.46
GOLGA6L4A6NEF3 TIMM8BP1-201ENST00000452384 211 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms