Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CDC42SE2Q9NRR3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 AC105021.1-202ENST00000570572 669 ntBASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE2Q9NRR3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 SPDYE17-201ENST00000412399 783 ntBASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 AC023274.1-201ENST00000418278 595 ntBASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 MCCD1P2-201ENST00000423228 335 ntBASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 AC069335.1-201ENST00000489972 472 ntBASIC10.69□□□□□ -0.7
CDC42SE2Q9NRR3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms