Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 AC092329.2-201ENST00000598402 547 ntBASIC18.5■□□□□ 0.55
RTN4Q9NQC3 AL353135.1-201ENST00000606729 504 ntBASIC18.5■□□□□ 0.55
RTN4Q9NQC3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 HSPA7-201ENST00000445535 1927 ntBASIC18.5■□□□□ 0.55
RTN4Q9NQC3 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RTN4Q9NQC3 MST1P2-201ENST00000457982 2291 ntBASIC18.49■□□□□ 0.55
RTN4Q9NQC3 AC106818.1-201ENST00000623223 3242 ntBASIC18.49■□□□□ 0.55
RTN4Q9NQC3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 PCED1CP-201ENST00000419887 785 ntBASIC18.49■□□□□ 0.55
RTN4Q9NQC3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 MIR5100-201ENST00000579544 119 ntBASIC18.49■□□□□ 0.55
RTN4Q9NQC3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.49■□□□□ 0.55
RTN4Q9NQC3 MYCNOS-202ENST00000641263 1313 ntBASIC18.49■□□□□ 0.55
RTN4Q9NQC3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 AC010331.1-201ENST00000611423 582 ntBASIC18.48■□□□□ 0.55
RTN4Q9NQC3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms