Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 ALG1L5P-201ENST00000482043 771 ntBASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 AP000344.2-201ENST00000512987 629 ntBASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 BANF1P1-201ENST00000553684 263 ntBASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 AC023024.2-201ENST00000623561 1993 ntBASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
POLR2J2Q9GZM3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 AL627223.1-201ENST00000416693 442 ntBASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 HIST3H2BA-201ENST00000436555 524 ntBASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 AC084364.1-201ENST00000551967 1556 ntBASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
POLR2J2Q9GZM3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
POLR2J2Q9GZM3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms