Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 RFPL4AP1-201ENST00000530883 850 ntBASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 AC092337.1-201ENST00000568699 1129 ntBASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 AC093512.1-201ENST00000617969 520 ntBASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
NHLRC1Q6VVB1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 PMS2P2-201ENST00000425039 1128 ntBASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 AC015910.1-201ENST00000579400 975 ntBASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 AL391069.4-201ENST00000609583 481 ntBASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 AC004461.2-201ENST00000629517 803 ntBASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.96□□□□□ -0.17
NHLRC1Q6VVB1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NHLRC1Q6VVB1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NHLRC1Q6VVB1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NHLRC1Q6VVB1 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NHLRC1Q6VVB1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NHLRC1Q6VVB1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.96□□□□□ -0.18
NHLRC1Q6VVB1 AC084364.1-201ENST00000551967 1556 ntBASIC13.96□□□□□ -0.18
NHLRC1Q6VVB1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NHLRC1Q6VVB1 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NHLRC1Q6VVB1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.96□□□□□ -0.18
NHLRC1Q6VVB1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NHLRC1Q6VVB1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AC005089.1-201ENST00000619486 2241 ntBASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 BTBD7P1-201ENST00000447253 1453 ntBASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.95□□□□□ -0.18
NHLRC1Q6VVB1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms