Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC000095.1-201ENST00000603208 874 ntBASIC15.66■□□□□ 0.1
CDH17Q12864 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH17Q12864 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH17Q12864 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH17Q12864 LINC02228-204ENST00000642115 2962 ntBASIC15.66■□□□□ 0.1
CDH17Q12864 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH17Q12864 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH17Q12864 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH17Q12864 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDH17Q12864 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH17Q12864 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH17Q12864 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH17Q12864 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH17Q12864 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH17Q12864 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH17Q12864 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH17Q12864 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH17Q12864 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH17Q12864 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDH17Q12864 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDH17Q12864 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
CDH17Q12864 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDH17Q12864 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 AC099063.4-201ENST00000641099 1602 ntBASIC15.65■□□□□ 0.1
CDH17Q12864 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH17Q12864 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH17Q12864 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH17Q12864 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDH17Q12864 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH17Q12864 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH17Q12864 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH17Q12864 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH17Q12864 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH17Q12864 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH17Q12864 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH17Q12864 AL390754.1-201ENST00000619088 582 ntBASIC15.65■□□□□ 0.1
CDH17Q12864 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDH17Q12864 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH17Q12864 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
CDH17Q12864 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDH17Q12864 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH17Q12864 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH17Q12864 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH17Q12864 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH17Q12864 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH17Q12864 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH17Q12864 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDH17Q12864 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH17Q12864 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH17Q12864 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH17Q12864 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH17Q12864 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.64■□□□□ 0.1
CDH17Q12864 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH17Q12864 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH17Q12864 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH17Q12864 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH17Q12864 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH17Q12864 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH17Q12864 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH17Q12864 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH17Q12864 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH17Q12864 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH17Q12864 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH17Q12864 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDH17Q12864 AC013726.1-201ENST00000563747 2285 ntBASIC15.64■□□□□ 0.09
CDH17Q12864 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CDH17Q12864 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDH17Q12864 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH17Q12864 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDH17Q12864 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH17Q12864 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH17Q12864 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDH17Q12864 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms