Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 AC098859.1-201ENST00000502915 1238 ntBASIC14.74□□□□□ -0.05
CHRNB3Q05901 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 AC117489.1-201ENST00000625169 3217 ntBASIC14.74□□□□□ -0.05
CHRNB3Q05901 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.74□□□□□ -0.05
CHRNB3Q05901 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNB3Q05901 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 AC140658.5-201ENST00000438532 169 ntBASIC14.73□□□□□ -0.05
CHRNB3Q05901 AC112482.1-201ENST00000492080 688 ntBASIC14.73□□□□□ -0.05
CHRNB3Q05901 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 AC061975.2-201ENST00000581722 295 ntBASIC14.73□□□□□ -0.05
CHRNB3Q05901 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 AC007064.4-201ENST00000637740 555 ntBASIC14.73□□□□□ -0.05
CHRNB3Q05901 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.73□□□□□ -0.05
CHRNB3Q05901 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNB3Q05901 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNB3Q05901 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNB3Q05901 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms