Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDC42P60953 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CDC42P60953 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CDC42P60953 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC42P60953 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC42P60953 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CDC42P60953 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CDC42P60953 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CDC42P60953 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CDC42P60953 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CDC42P60953 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.22□□□□□ -0.13
CDC42P60953 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.22□□□□□ -0.13
CDC42P60953 HNRNPUP1-201ENST00000554987 333 ntBASIC14.22□□□□□ -0.13
CDC42P60953 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.22□□□□□ -0.13
CDC42P60953 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.22□□□□□ -0.13
CDC42P60953 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC42P60953 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 AC006504.5-208ENST00000588784 2401 ntBASIC14.22□□□□□ -0.13
CDC42P60953 CICP11-201ENST00000434745 2827 ntBASIC14.22□□□□□ -0.13
CDC42P60953 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CDC42P60953 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.22□□□□□ -0.13
CDC42P60953 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.22□□□□□ -0.13
CDC42P60953 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CDC42P60953 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.21□□□□□ -0.13
CDC42P60953 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDC42P60953 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.21□□□□□ -0.13
CDC42P60953 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.21□□□□□ -0.13
CDC42P60953 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.21□□□□□ -0.13
CDC42P60953 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CDC42P60953 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
CDC42P60953 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CDC42P60953 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.21□□□□□ -0.13
CDC42P60953 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.21□□□□□ -0.13
CDC42P60953 AC098831.1-202ENST00000438821 336 ntBASIC14.21□□□□□ -0.13
CDC42P60953 AC009947.1-201ENST00000444350 727 ntBASIC14.21□□□□□ -0.13
CDC42P60953 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.21□□□□□ -0.13
CDC42P60953 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CDC42P60953 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.21□□□□□ -0.13
CDC42P60953 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.21□□□□□ -0.13
CDC42P60953 AC097359.3-201ENST00000603982 1210 ntBASIC14.21□□□□□ -0.13
CDC42P60953 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 AC041040.2-201ENST00000622926 2899 ntBASIC14.21□□□□□ -0.13
CDC42P60953 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CDC42P60953 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDC42P60953 LINC01230-201ENST00000625222 3017 ntBASIC14.21□□□□□ -0.13
CDC42P60953 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CDC42P60953 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CDC42P60953 AC084364.1-201ENST00000551967 1556 ntBASIC14.21□□□□□ -0.14
CDC42P60953 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDC42P60953 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.21□□□□□ -0.14
CDC42P60953 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.21□□□□□ -0.14
CDC42P60953 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDC42P60953 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CDC42P60953 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CDC42P60953 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CDC42P60953 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDC42P60953 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC42P60953 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC42P60953 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDC42P60953 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.2□□□□□ -0.14
CDC42P60953 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms