Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TUBP50607 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TUBP50607 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
TUBP50607 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBP50607 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TUBP50607 TTTY23B-201ENST00000442790 549 ntBASIC16.34■□□□□ 0.21
TUBP50607 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TUBP50607 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBP50607 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.34■□□□□ 0.21
TUBP50607 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.34■□□□□ 0.21
TUBP50607 AC015910.1-201ENST00000579400 975 ntBASIC16.34■□□□□ 0.21
TUBP50607 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
TUBP50607 AC015936.2-201ENST00000593177 259 ntBASIC16.34■□□□□ 0.21
TUBP50607 AL049840.4-201ENST00000602422 811 ntBASIC16.34■□□□□ 0.21
TUBP50607 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
TUBP50607 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.34■□□□□ 0.21
TUBP50607 AL162274.1-201ENST00000617191 1098 ntBASIC16.34■□□□□ 0.21
TUBP50607 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.34■□□□□ 0.21
TUBP50607 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TUBP50607 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TUBP50607 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBP50607 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.34■□□□□ 0.21
TUBP50607 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBP50607 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBP50607 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TUBP50607 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.21
TUBP50607 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TUBP50607 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TUBP50607 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
TUBP50607 OR8S1-201ENST00000310194 1080 ntBASIC16.33■□□□□ 0.2
TUBP50607 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
TUBP50607 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.33■□□□□ 0.2
TUBP50607 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.33■□□□□ 0.2
TUBP50607 AC134915.1-201ENST00000426461 574 ntBASIC16.33■□□□□ 0.2
TUBP50607 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.33■□□□□ 0.2
TUBP50607 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.33■□□□□ 0.2
TUBP50607 ENPP7P5-201ENST00000541031 1031 ntBASIC16.33■□□□□ 0.2
TUBP50607 AC124283.3-201ENST00000570869 594 ntBASIC16.33■□□□□ 0.2
TUBP50607 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.33■□□□□ 0.2
TUBP50607 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.33■□□□□ 0.2
TUBP50607 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TUBP50607 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TUBP50607 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.33■□□□□ 0.2
TUBP50607 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 NFIC-211ENST00000641145 8399 ntBASIC16.33■□□□□ 0.2
TUBP50607 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.33■□□□□ 0.2
TUBP50607 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBP50607 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TUBP50607 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TUBP50607 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBP50607 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TUBP50607 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBP50607 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TUBP50607 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TUBP50607 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBP50607 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBP50607 SOCS2P1-201ENST00000417727 557 ntBASIC16.32■□□□□ 0.2
TUBP50607 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBP50607 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBP50607 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBP50607 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms