Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HTR3AP46098 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.37□□□□□ -0.11
HTR3AP46098 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HTR3AP46098 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HTR3AP46098 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HTR3AP46098 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.37□□□□□ -0.11
HTR3AP46098 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.37□□□□□ -0.11
HTR3AP46098 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.37□□□□□ -0.11
HTR3AP46098 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.37□□□□□ -0.11
HTR3AP46098 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.37□□□□□ -0.11
HTR3AP46098 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.37□□□□□ -0.11
HTR3AP46098 AC097359.3-201ENST00000603982 1210 ntBASIC14.37□□□□□ -0.11
HTR3AP46098 AL158211.3-201ENST00000607385 239 ntBASIC14.37□□□□□ -0.11
HTR3AP46098 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.37□□□□□ -0.11
HTR3AP46098 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.37□□□□□ -0.11
HTR3AP46098 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HTR3AP46098 AP003680.1-201ENST00000598970 3660 ntBASIC14.37□□□□□ -0.11
HTR3AP46098 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.37□□□□□ -0.11
HTR3AP46098 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HTR3AP46098 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.36□□□□□ -0.11
HTR3AP46098 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.36□□□□□ -0.11
HTR3AP46098 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
HTR3AP46098 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.36□□□□□ -0.11
HTR3AP46098 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.36□□□□□ -0.11
HTR3AP46098 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HTR3AP46098 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HTR3AP46098 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HTR3AP46098 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HTR3AP46098 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HTR3AP46098 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 RPL37AP1-201ENST00000412502 279 ntBASIC14.36□□□□□ -0.11
HTR3AP46098 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.36□□□□□ -0.11
HTR3AP46098 AL645939.2-201ENST00000427340 991 ntBASIC14.36□□□□□ -0.11
HTR3AP46098 METTL21AP1-201ENST00000438852 635 ntBASIC14.36□□□□□ -0.11
HTR3AP46098 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HTR3AP46098 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.36□□□□□ -0.11
HTR3AP46098 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.36□□□□□ -0.11
HTR3AP46098 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.36□□□□□ -0.11
HTR3AP46098 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.36□□□□□ -0.11
HTR3AP46098 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.36□□□□□ -0.11
HTR3AP46098 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms