Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH1P12830 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH1P12830 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDH1P12830 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH1P12830 MIR770-201ENST00000390219 98 ntBASIC15.15■□□□□ 0.02
CDH1P12830 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDH1P12830 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH1P12830 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH1P12830 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH1P12830 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH1P12830 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH1P12830 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.15■□□□□ 0.02
CDH1P12830 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 AC004461.2-201ENST00000629517 803 ntBASIC15.15■□□□□ 0.02
CDH1P12830 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH1P12830 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.15■□□□□ 0.02
CDH1P12830 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.15■□□□□ 0.02
CDH1P12830 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDH1P12830 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDH1P12830 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDH1P12830 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDH1P12830 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH1P12830 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH1P12830 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH1P12830 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDH1P12830 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH1P12830 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH1P12830 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CDH1P12830 CICP23-201ENST00000605013 2741 ntBASIC15.14■□□□□ 0.01
CDH1P12830 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH1P12830 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 MRPS18AP1-201ENST00000414458 589 ntBASIC15.14■□□□□ 0.01
CDH1P12830 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH1P12830 AC015922.1-201ENST00000421102 1152 ntBASIC15.14■□□□□ 0.01
CDH1P12830 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH1P12830 FAM8A3P-201ENST00000427218 844 ntBASIC15.14■□□□□ 0.01
CDH1P12830 AC114501.2-201ENST00000439631 535 ntBASIC15.14■□□□□ 0.01
CDH1P12830 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH1P12830 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 AC135586.1-201ENST00000539323 574 ntBASIC15.14■□□□□ 0.01
CDH1P12830 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH1P12830 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH1P12830 AC004840.1-201ENST00000636359 365 ntBASIC15.14■□□□□ 0.01
CDH1P12830 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH1P12830 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH1P12830 C18orf15-201ENST00000623680 2534 ntBASIC15.14■□□□□ 0.01
CDH1P12830 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH1P12830 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDH1P12830 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH1P12830 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms