Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.55□□□□□ -0.08
HCN1O60741 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.55□□□□□ -0.08
HCN1O60741 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.55□□□□□ -0.08
HCN1O60741 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HCN1O60741 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.55□□□□□ -0.08
HCN1O60741 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HCN1O60741 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.55□□□□□ -0.08
HCN1O60741 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.55□□□□□ -0.08
HCN1O60741 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.55□□□□□ -0.08
HCN1O60741 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.55□□□□□ -0.08
HCN1O60741 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.55□□□□□ -0.08
HCN1O60741 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.55□□□□□ -0.08
HCN1O60741 AL512361.1-201ENST00000554200 418 ntBASIC14.55□□□□□ -0.08
HCN1O60741 AC243562.2-201ENST00000561247 970 ntBASIC14.55□□□□□ -0.08
HCN1O60741 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.55□□□□□ -0.08
HCN1O60741 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.55□□□□□ -0.08
HCN1O60741 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.55□□□□□ -0.08
HCN1O60741 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.55□□□□□ -0.08
HCN1O60741 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.55□□□□□ -0.08
HCN1O60741 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HCN1O60741 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.55□□□□□ -0.08
HCN1O60741 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HCN1O60741 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.54□□□□□ -0.08
HCN1O60741 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.54□□□□□ -0.08
HCN1O60741 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.54□□□□□ -0.08
HCN1O60741 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.54□□□□□ -0.08
HCN1O60741 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.54□□□□□ -0.08
HCN1O60741 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 FO393414.2-201ENST00000405153 598 ntBASIC14.54□□□□□ -0.08
HCN1O60741 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.54□□□□□ -0.08
HCN1O60741 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.54□□□□□ -0.08
HCN1O60741 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.54□□□□□ -0.08
HCN1O60741 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.54□□□□□ -0.08
HCN1O60741 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
HCN1O60741 SPDYE22P-201ENST00000582158 798 ntBASIC14.54□□□□□ -0.08
HCN1O60741 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.54□□□□□ -0.08
HCN1O60741 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.54□□□□□ -0.08
HCN1O60741 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.54□□□□□ -0.08
HCN1O60741 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.54□□□□□ -0.08
HCN1O60741 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.54□□□□□ -0.08
HCN1O60741 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.54□□□□□ -0.08
HCN1O60741 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HCN1O60741 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
HCN1O60741 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HCN1O60741 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HCN1O60741 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.54□□□□□ -0.08
HCN1O60741 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCN1O60741 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HCN1O60741 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCN1O60741 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HCN1O60741 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HCN1O60741 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.53□□□□□ -0.08
HCN1O60741 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.53□□□□□ -0.08
HCN1O60741 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms