Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.75■□□□□ 0.11
RIPK2O43353 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.75■□□□□ 0.11
RIPK2O43353 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.75■□□□□ 0.11
RIPK2O43353 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.75■□□□□ 0.11
RIPK2O43353 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.75■□□□□ 0.11
RIPK2O43353 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.75■□□□□ 0.11
RIPK2O43353 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 AC092135.3-201ENST00000624151 1846 ntBASIC15.75■□□□□ 0.11
RIPK2O43353 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RIPK2O43353 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RIPK2O43353 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.75■□□□□ 0.11
RIPK2O43353 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RIPK2O43353 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
RIPK2O43353 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RIPK2O43353 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.74■□□□□ 0.11
RIPK2O43353 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.74■□□□□ 0.11
RIPK2O43353 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.74■□□□□ 0.11
RIPK2O43353 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
RIPK2O43353 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 AC152010.1-201ENST00000415779 2006 ntBASIC15.74■□□□□ 0.11
RIPK2O43353 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RIPK2O43353 AC004870.1-201ENST00000315132 882 ntBASIC15.74■□□□□ 0.11
RIPK2O43353 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.74■□□□□ 0.11
RIPK2O43353 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RIPK2O43353 SPCS2P4-201ENST00000436160 681 ntBASIC15.74■□□□□ 0.11
RIPK2O43353 FAAHP1-202ENST00000446499 1238 ntBASIC15.74■□□□□ 0.11
RIPK2O43353 RN7SL589P-201ENST00000481268 310 ntBASIC15.74■□□□□ 0.11
RIPK2O43353 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RIPK2O43353 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.74■□□□□ 0.11
RIPK2O43353 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.74■□□□□ 0.11
RIPK2O43353 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.74■□□□□ 0.11
RIPK2O43353 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 AC092865.6-201ENST00000642101 219 ntBASIC15.74■□□□□ 0.11
RIPK2O43353 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.74■□□□□ 0.11
RIPK2O43353 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
RIPK2O43353 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
RIPK2O43353 AC015802.1-201ENST00000588104 1449 ntBASIC15.74■□□□□ 0.11
RIPK2O43353 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RIPK2O43353 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 AP3S2-216ENST00000617003 1561 ntBASIC15.74■□□□□ 0.11
RIPK2O43353 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RIPK2O43353 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.73■□□□□ 0.11
RIPK2O43353 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RIPK2O43353 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RIPK2O43353 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RIPK2O43353 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RIPK2O43353 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 AC012508.2-201ENST00000567613 1472 ntBASIC15.73■□□□□ 0.11
RIPK2O43353 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RIPK2O43353 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
RIPK2O43353 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RIPK2O43353 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RIPK2O43353 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RIPK2O43353 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RIPK2O43353 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms