Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.7□□□□□ -0.06
UPK1AO00322 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UPK1AO00322 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.7□□□□□ -0.06
UPK1AO00322 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
UPK1AO00322 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.69□□□□□ -0.06
UPK1AO00322 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 MIR943-201ENST00000401286 94 ntBASIC14.69□□□□□ -0.06
UPK1AO00322 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.69□□□□□ -0.06
UPK1AO00322 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.69□□□□□ -0.06
UPK1AO00322 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.69□□□□□ -0.06
UPK1AO00322 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 DUX4L27-201ENST00000554796 1261 ntBASIC14.69□□□□□ -0.06
UPK1AO00322 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.69□□□□□ -0.06
UPK1AO00322 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.69□□□□□ -0.06
UPK1AO00322 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 GPALPP1-207ENST00000611650 899 ntBASIC14.69□□□□□ -0.06
UPK1AO00322 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.69□□□□□ -0.06
UPK1AO00322 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
UPK1AO00322 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.69□□□□□ -0.06
UPK1AO00322 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.69□□□□□ -0.06
UPK1AO00322 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
UPK1AO00322 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
UPK1AO00322 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
UPK1AO00322 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UPK1AO00322 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.68□□□□□ -0.06
UPK1AO00322 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 AC087499.5-201ENST00000452760 1342 ntBASIC14.68□□□□□ -0.06
UPK1AO00322 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.68□□□□□ -0.06
UPK1AO00322 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1AO00322 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
UPK1AO00322 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.68□□□□□ -0.06
UPK1AO00322 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.68□□□□□ -0.06
UPK1AO00322 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.68□□□□□ -0.06
UPK1AO00322 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.68□□□□□ -0.06
UPK1AO00322 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1AO00322 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.68□□□□□ -0.06
UPK1AO00322 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1AO00322 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.68□□□□□ -0.06
UPK1AO00322 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.68□□□□□ -0.06
UPK1AO00322 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.68□□□□□ -0.06
UPK1AO00322 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.68□□□□□ -0.06
UPK1AO00322 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
UPK1AO00322 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.68□□□□□ -0.06
UPK1AO00322 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UPK1AO00322 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms