Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 AL109954.1-202ENST00000564051 2148 ntBASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HLA-DRB4X5D2U9 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 CICP24-201ENST00000605464 2705 ntBASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 LINC00528-201ENST00000600723 2160 ntBASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 AC097359.3-201ENST00000603982 1210 ntBASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 AL158211.3-201ENST00000607385 239 ntBASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 AL138828.2-201ENST00000615812 383 ntBASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 AL033527.5-202ENST00000641632 1098 ntBASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
HLA-DRB4X5D2U9 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 AC007191.1-201ENST00000623179 2995 ntBASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HLA-DRB4X5D2U9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms