Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 AC009533.2-201ENST00000543664 586 ntBASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 AC006058.3-201ENST00000606217 1069 ntBASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 AP001412.1-201ENST00000608405 714 ntBASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 AC026471.5-201ENST00000615068 467 ntBASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 CICP11-201ENST00000434745 2827 ntBASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.77□□□□□ -0.52
TRAPPC1Q9Y5R8 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 RBM17P1-201ENST00000453646 1190 ntBASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 PENK-204ENST00000518770 863 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 CICP16-201ENST00000502609 2813 ntBASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRAPPC1Q9Y5R8 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 AC015818.8-201ENST00000587907 1519 ntBASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TRAPPC1Q9Y5R8 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms