Protein–RNA interactions for Protein: Q9P2J3

KLHL9, Kelch-like protein 9, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL9Q9P2J3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 AC025048.3-201ENST00000590609 569 ntBASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 AC005702.4-201ENST00000618393 416 ntBASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 AC138035.3-201ENST00000622706 2791 ntBASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.17□□□□□ -0.14
KLHL9Q9P2J3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 AC135586.1-201ENST00000539323 574 ntBASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 AC009407.1-201ENST00000568958 598 ntBASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KLHL9Q9P2J3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 TCAF2P1-201ENST00000291129 2421 ntBASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 MRPS18AP1-201ENST00000414458 589 ntBASIC14.15□□□□□ -0.14
KLHL9Q9P2J3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms