Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 PPT1-213ENST00000641319 2388 ntBASIC14.2□□□□□ -0.14
HMG20AQ9NP66 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 AC023024.2-201ENST00000623561 1993 ntBASIC14.2□□□□□ -0.14
HMG20AQ9NP66 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMG20AQ9NP66 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 AC131009.4-201ENST00000624048 1740 ntBASIC14.19□□□□□ -0.14
HMG20AQ9NP66 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMG20AQ9NP66 AL353732.1-201ENST00000569618 1459 ntBASIC14.18□□□□□ -0.14
HMG20AQ9NP66 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 U82695.1-201ENST00000635752 1889 ntBASIC14.18□□□□□ -0.14
HMG20AQ9NP66 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 MIR1199-201ENST00000621445 119 ntBASIC14.18□□□□□ -0.14
HMG20AQ9NP66 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMG20AQ9NP66 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms