Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 KRT18P32-201ENST00000424695 1287 ntBASIC13.98□□□□□ -0.17
PTP4A1Q93096 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 AC140479.7-201ENST00000636301 2332 ntBASIC13.98□□□□□ -0.17
PTP4A1Q93096 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 ALG1L8P-201ENST00000533887 760 ntBASIC13.97□□□□□ -0.17
PTP4A1Q93096 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PTP4A1Q93096 REXO1L2P-201ENST00000425429 2069 ntBASIC13.97□□□□□ -0.17
PTP4A1Q93096 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
PTP4A1Q93096 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PTP4A1Q93096 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PTP4A1Q93096 FAM8A3P-201ENST00000427218 844 ntBASIC13.96□□□□□ -0.17
PTP4A1Q93096 FAM58DP-201ENST00000428076 619 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms