Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 AC027369.6-201ENST00000525520 931 ntBASIC16.17■□□□□ 0.18
RFX6Q8HWS3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 AC051619.7-201ENST00000568314 623 ntBASIC16.17■□□□□ 0.18
RFX6Q8HWS3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 LINC01115-203ENST00000606068 577 ntBASIC16.17■□□□□ 0.18
RFX6Q8HWS3 AC023511.2-201ENST00000618803 211 ntBASIC16.17■□□□□ 0.18
RFX6Q8HWS3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 AC107890.1-201ENST00000422478 521 ntBASIC16.16■□□□□ 0.18
RFX6Q8HWS3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 AC010336.2-201ENST00000564226 506 ntBASIC16.16■□□□□ 0.18
RFX6Q8HWS3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 AC015910.1-201ENST00000579400 975 ntBASIC16.16■□□□□ 0.18
RFX6Q8HWS3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 AC093028.1-201ENST00000622998 982 ntBASIC16.16■□□□□ 0.18
RFX6Q8HWS3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 AL109936.8-201ENST00000641772 604 ntBASIC16.16■□□□□ 0.18
RFX6Q8HWS3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.16■□□□□ 0.18
RFX6Q8HWS3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms