Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 EEF1DP4-201ENST00000446006 880 ntBASIC14.9□□□□□ -0.02
RAB43Q86YS6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 RN7SL837P-201ENST00000463010 287 ntBASIC14.9□□□□□ -0.02
RAB43Q86YS6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 AC106886.1-201ENST00000568660 600 ntBASIC14.9□□□□□ -0.02
RAB43Q86YS6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 AL162274.1-201ENST00000617191 1098 ntBASIC14.9□□□□□ -0.02
RAB43Q86YS6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB43Q86YS6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB43Q86YS6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 AC007389.4-201ENST00000454674 793 ntBASIC14.89□□□□□ -0.03
RAB43Q86YS6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 HILS1-202ENST00000545329 423 ntBASIC14.89□□□□□ -0.03
RAB43Q86YS6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB43Q86YS6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB43Q86YS6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RAB43Q86YS6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB43Q86YS6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB43Q86YS6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB43Q86YS6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB43Q86YS6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RAB43Q86YS6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB43Q86YS6 ALOX12P2-203ENST00000570921 1945 ntBASIC14.88□□□□□ -0.03
RAB43Q86YS6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB43Q86YS6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB43Q86YS6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RAB43Q86YS6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB43Q86YS6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB43Q86YS6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB43Q86YS6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms