Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA3P29320 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA3P29320 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
EPHA3P29320 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA3P29320 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA3P29320 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA3P29320 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA3P29320 RPL13AP23-201ENST00000480739 586 ntBASIC15.14■□□□□ 0.01
EPHA3P29320 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA3P29320 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.14■□□□□ 0.01
EPHA3P29320 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.14■□□□□ 0.01
EPHA3P29320 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.14■□□□□ 0.01
EPHA3P29320 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
EPHA3P29320 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.14■□□□□ 0.01
EPHA3P29320 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA3P29320 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
EPHA3P29320 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA3P29320 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.14■□□□□ 0.01
EPHA3P29320 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.14■□□□□ 0.01
EPHA3P29320 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
EPHA3P29320 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHA3P29320 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
EPHA3P29320 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
EPHA3P29320 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
EPHA3P29320 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
EPHA3P29320 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.13■□□□□ 0.01
EPHA3P29320 SPCS2P4-201ENST00000436160 681 ntBASIC15.13■□□□□ 0.01
EPHA3P29320 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.13■□□□□ 0.01
EPHA3P29320 RN7SL589P-201ENST00000481268 310 ntBASIC15.13■□□□□ 0.01
EPHA3P29320 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.13■□□□□ 0.01
EPHA3P29320 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 FAM86C2P-203ENST00000528684 1004 ntBASIC15.13■□□□□ 0.01
EPHA3P29320 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
EPHA3P29320 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.13■□□□□ 0.01
EPHA3P29320 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.13■□□□□ 0.01
EPHA3P29320 LINC01225-203ENST00000563550 1244 ntBASIC15.13■□□□□ 0.01
EPHA3P29320 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.13■□□□□ 0.01
EPHA3P29320 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.13■□□□□ 0.01
EPHA3P29320 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.13■□□□□ 0.01
EPHA3P29320 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
EPHA3P29320 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
EPHA3P29320 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.13■□□□□ 0.01
EPHA3P29320 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
EPHA3P29320 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
EPHA3P29320 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
EPHA3P29320 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EPHA3P29320 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
EPHA3P29320 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
EPHA3P29320 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.12■□□□□ 0.01
EPHA3P29320 AP3S2-216ENST00000617003 1561 ntBASIC15.12■□□□□ 0.01
EPHA3P29320 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.12■□□□□ 0.01
EPHA3P29320 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 BX640514.1-201ENST00000583223 1918 ntBASIC15.12■□□□□ 0.01
EPHA3P29320 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EPHA3P29320 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms