Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.08■□□□□ 0.01
CPNE5Q9HCH3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CPNE5Q9HCH3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.08■□□□□ 0.01
CPNE5Q9HCH3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CPNE5Q9HCH3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.08■□□□□ 0.01
CPNE5Q9HCH3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.08■□□□□ 0.01
CPNE5Q9HCH3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE5Q9HCH3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE5Q9HCH3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE5Q9HCH3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.08■□□□□ 0
CPNE5Q9HCH3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE5Q9HCH3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CPNE5Q9HCH3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
CPNE5Q9HCH3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE5Q9HCH3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE5Q9HCH3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE5Q9HCH3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.08■□□□□ 0
CPNE5Q9HCH3 BCRP2-202ENST00000447763 634 ntBASIC15.08■□□□□ 0
CPNE5Q9HCH3 PFN1P12-201ENST00000455938 534 ntBASIC15.08■□□□□ 0
CPNE5Q9HCH3 BCRP6-201ENST00000510112 632 ntBASIC15.08■□□□□ 0
CPNE5Q9HCH3 BCRP7-201ENST00000511549 544 ntBASIC15.08■□□□□ 0
CPNE5Q9HCH3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.08■□□□□ 0
CPNE5Q9HCH3 TDH-203ENST00000531764 1110 ntBASIC15.08■□□□□ 0
CPNE5Q9HCH3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.08■□□□□ 0
CPNE5Q9HCH3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.08■□□□□ 0
CPNE5Q9HCH3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.08■□□□□ 0
CPNE5Q9HCH3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.08■□□□□ 0
CPNE5Q9HCH3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.08■□□□□ 0
CPNE5Q9HCH3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE5Q9HCH3 AL022328.1-201ENST00000610050 478 ntBASIC15.08■□□□□ 0
CPNE5Q9HCH3 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.08■□□□□ 0
CPNE5Q9HCH3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE5Q9HCH3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CPNE5Q9HCH3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE5Q9HCH3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE5Q9HCH3 SNX18-202ENST00000343017 3140 ntBASIC15.08■□□□□ 0
CPNE5Q9HCH3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.08■□□□□ 0
CPNE5Q9HCH3 PCGF3-213ENST00000620529 1899 ntBASIC15.08■□□□□ 0
CPNE5Q9HCH3 AL589702.1-201ENST00000641229 1509 ntBASIC15.07■□□□□ 0
CPNE5Q9HCH3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 ELK2AP-201ENST00000392510 1007 ntBASIC15.07■□□□□ 0
CPNE5Q9HCH3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 AC007551.1-201ENST00000457394 519 ntBASIC15.07■□□□□ 0
CPNE5Q9HCH3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 CU634019.7-201ENST00000624153 1185 ntBASIC15.07■□□□□ 0
CPNE5Q9HCH3 FP236241.2-201ENST00000624906 1185 ntBASIC15.07■□□□□ 0
CPNE5Q9HCH3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 KRT8P22-201ENST00000562317 1415 ntBASIC15.07■□□□□ 0
CPNE5Q9HCH3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE5Q9HCH3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.07■□□□□ 0
CPNE5Q9HCH3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE5Q9HCH3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE5Q9HCH3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CPNE5Q9HCH3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CPNE5Q9HCH3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE5Q9HCH3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CPNE5Q9HCH3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE5Q9HCH3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE5Q9HCH3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CPNE5Q9HCH3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms