Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 AC011477.6-201ENST00000604980 1927 ntBASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PCGF1Q9BSM1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 SPDYE19P-201ENST00000338590 713 ntBASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 GNAQP1-201ENST00000444815 1067 ntBASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 SPTLC1P1-201ENST00000447199 261 ntBASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 AL132655.2-201ENST00000596276 594 ntBASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 KRT8P37-201ENST00000451609 1420 ntBASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PCGF1Q9BSM1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PCGF1Q9BSM1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms