Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 GPS2P2-201ENST00000430745 888 ntBASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 ALG1L8P-201ENST00000533887 760 ntBASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 BANF1P1-201ENST00000553684 263 ntBASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 AC011467.4-201ENST00000594891 528 ntBASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN22Q8N7P3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 FO393414.2-201ENST00000405153 598 ntBASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 AC055717.3-201ENST00000622967 595 ntBASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN22Q8N7P3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 AL161772.1-201ENST00000610494 4412 ntBASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN22Q8N7P3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms