Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS6Q86YV9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HPS6Q86YV9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 FO538757.1-201ENST00000623083 1397 ntBASIC15.42■□□□□ 0.06
HPS6Q86YV9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 RNU1-129P-201ENST00000384064 167 ntBASIC15.42■□□□□ 0.06
HPS6Q86YV9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 U1.21-201ENST00000580816 167 ntBASIC15.42■□□□□ 0.06
HPS6Q86YV9 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 AL031055.1-201ENST00000606362 631 ntBASIC15.42■□□□□ 0.06
HPS6Q86YV9 MIR6080-201ENST00000617359 66 ntBASIC15.42■□□□□ 0.06
HPS6Q86YV9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 AC117489.1-201ENST00000625169 3217 ntBASIC15.42■□□□□ 0.06
HPS6Q86YV9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HPS6Q86YV9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HPS6Q86YV9 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 FGD5P1-202ENST00000614866 2498 ntBASIC15.41■□□□□ 0.06
HPS6Q86YV9 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 TREML5P-201ENST00000421694 576 ntBASIC15.41■□□□□ 0.06
HPS6Q86YV9 GAPDHP21-201ENST00000450301 1010 ntBASIC15.41■□□□□ 0.06
HPS6Q86YV9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 AP000842.3-202ENST00000569238 1080 ntBASIC15.41■□□□□ 0.06
HPS6Q86YV9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 LINC02560-201ENST00000596379 459 ntBASIC15.41■□□□□ 0.06
HPS6Q86YV9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.41■□□□□ 0.06
HPS6Q86YV9 AL390754.1-201ENST00000619088 582 ntBASIC15.41■□□□□ 0.06
HPS6Q86YV9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HPS6Q86YV9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HPS6Q86YV9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
HPS6Q86YV9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.4■□□□□ 0.06
HPS6Q86YV9 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HPS6Q86YV9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HPS6Q86YV9 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms