Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
PMS1P54277 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PMS1P54277 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PMS1P54277 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PMS1P54277 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PMS1P54277 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PMS1P54277 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PMS1P54277 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PMS1P54277 WASH3P-207ENST00000560956 1394 ntBASIC17.08■□□□□ 0.32
PMS1P54277 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PMS1P54277 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PMS1P54277 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.08■□□□□ 0.32
PMS1P54277 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PMS1P54277 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.08■□□□□ 0.32
PMS1P54277 SDHAP3-202ENST00000515467 728 ntBASIC17.08■□□□□ 0.32
PMS1P54277 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.08■□□□□ 0.32
PMS1P54277 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.08■□□□□ 0.32
PMS1P54277 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PMS1P54277 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.08■□□□□ 0.32
PMS1P54277 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
PMS1P54277 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.08■□□□□ 0.32
PMS1P54277 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
PMS1P54277 AC004461.2-201ENST00000629517 803 ntBASIC17.08■□□□□ 0.32
PMS1P54277 AC079781.4-201ENST00000641908 219 ntBASIC17.08■□□□□ 0.32
PMS1P54277 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
PMS1P54277 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PMS1P54277 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.08■□□□□ 0.32
PMS1P54277 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PMS1P54277 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PMS1P54277 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PMS1P54277 REXO1L4P-201ENST00000605109 1937 ntBASIC17.08■□□□□ 0.32
PMS1P54277 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.07■□□□□ 0.32
PMS1P54277 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.07■□□□□ 0.32
PMS1P54277 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PMS1P54277 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.07■□□□□ 0.32
PMS1P54277 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.07■□□□□ 0.32
PMS1P54277 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PMS1P54277 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PMS1P54277 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.07■□□□□ 0.32
PMS1P54277 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.07■□□□□ 0.32
PMS1P54277 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.07■□□□□ 0.32
PMS1P54277 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.07■□□□□ 0.32
PMS1P54277 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.07■□□□□ 0.32
PMS1P54277 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.07■□□□□ 0.32
PMS1P54277 AC009407.1-201ENST00000568958 598 ntBASIC17.07■□□□□ 0.32
PMS1P54277 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.07■□□□□ 0.32
PMS1P54277 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 AL158211.3-201ENST00000607385 239 ntBASIC17.07■□□□□ 0.32
PMS1P54277 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.07■□□□□ 0.32
PMS1P54277 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.07■□□□□ 0.32
PMS1P54277 AC139530.3-201ENST00000620344 690 ntBASIC17.07■□□□□ 0.32
PMS1P54277 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.07■□□□□ 0.32
PMS1P54277 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 CICP14-201ENST00000629111 2732 ntBASIC17.07■□□□□ 0.32
PMS1P54277 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.07■□□□□ 0.32
PMS1P54277 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.07■□□□□ 0.32
PMS1P54277 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PMS1P54277 SNX18-202ENST00000343017 3140 ntBASIC17.07■□□□□ 0.32
PMS1P54277 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PMS1P54277 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PMS1P54277 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PMS1P54277 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.06■□□□□ 0.32
PMS1P54277 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 AL390755.1-201ENST00000623716 2027 ntBASIC17.06■□□□□ 0.32
PMS1P54277 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.06■□□□□ 0.32
PMS1P54277 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PMS1P54277 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PMS1P54277 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 AL589987.1-201ENST00000453380 819 ntBASIC17.06■□□□□ 0.32
PMS1P54277 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.06■□□□□ 0.32
PMS1P54277 SPDYE18-201ENST00000510091 1050 ntBASIC17.06■□□□□ 0.32
PMS1P54277 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.06■□□□□ 0.32
PMS1P54277 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PMS1P54277 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.06■□□□□ 0.32
PMS1P54277 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.06■□□□□ 0.32
PMS1P54277 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PMS1P54277 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms