Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL1P22362 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 AC068418.2-201ENST00000577309 3703 ntBASIC13.35□□□□□ -0.27
CCL1P22362 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL1P22362 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 NORAD-201ENST00000565493 5339 ntBASIC13.35□□□□□ -0.27
CCL1P22362 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL1P22362 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CCL1P22362 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CCL1P22362 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL1P22362 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL1P22362 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
CCL1P22362 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL1P22362 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL1P22362 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.34□□□□□ -0.27
CCL1P22362 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL1P22362 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL1P22362 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 SNHG9-202ENST00000564014 471 ntBASIC13.34□□□□□ -0.27
CCL1P22362 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
CCL1P22362 AL109936.8-201ENST00000641772 604 ntBASIC13.34□□□□□ -0.27
CCL1P22362 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 AL136379.1-201ENST00000623471 2642 ntBASIC13.34□□□□□ -0.27
CCL1P22362 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCL1P22362 AC087499.5-201ENST00000452760 1342 ntBASIC13.34□□□□□ -0.27
CCL1P22362 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL1P22362 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL1P22362 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL1P22362 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.33□□□□□ -0.27
CCL1P22362 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL1P22362 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.33□□□□□ -0.27
CCL1P22362 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.33□□□□□ -0.27
CCL1P22362 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CCL1P22362 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 AC007787.1-201ENST00000588095 1583 ntBASIC13.33□□□□□ -0.28
CCL1P22362 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL1P22362 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL1P22362 AL139400.1-201ENST00000366220 510 ntBASIC13.33□□□□□ -0.28
CCL1P22362 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL1P22362 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.33□□□□□ -0.28
CCL1P22362 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms