Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.09□□□□□ -0.15
PPP1R3DO95685 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 FGD5P1-202ENST00000614866 2498 ntBASIC14.09□□□□□ -0.15
PPP1R3DO95685 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PPP1R3DO95685 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.09□□□□□ -0.15
PPP1R3DO95685 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PPP1R3DO95685 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.09□□□□□ -0.15
PPP1R3DO95685 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
PPP1R3DO95685 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PPP1R3DO95685 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PPP1R3DO95685 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PPP1R3DO95685 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
PPP1R3DO95685 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PPP1R3DO95685 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PPP1R3DO95685 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PPP1R3DO95685 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
PPP1R3DO95685 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
PPP1R3DO95685 AC007292.2-201ENST00000593524 1812 ntBASIC14.08□□□□□ -0.15
PPP1R3DO95685 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PPP1R3DO95685 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PPP1R3DO95685 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.15
PPP1R3DO95685 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PPP1R3DO95685 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 RPL5P21-201ENST00000404620 815 ntBASIC14.08□□□□□ -0.16
PPP1R3DO95685 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 MIR4469-201ENST00000583919 79 ntBASIC14.08□□□□□ -0.16
PPP1R3DO95685 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.08□□□□□ -0.16
PPP1R3DO95685 MROH4P-201ENST00000431302 1578 ntBASIC14.08□□□□□ -0.16
PPP1R3DO95685 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PPP1R3DO95685 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PPP1R3DO95685 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PPP1R3DO95685 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PPP1R3DO95685 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PPP1R3DO95685 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 AC023908.3-201ENST00000564211 3047 ntBASIC14.07□□□□□ -0.16
PPP1R3DO95685 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PPP1R3DO95685 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 SBF1P1-201ENST00000444527 5631 ntBASIC14.07□□□□□ -0.16
PPP1R3DO95685 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PPP1R3DO95685 FO393414.2-201ENST00000405153 598 ntBASIC14.07□□□□□ -0.16
PPP1R3DO95685 SPDYE17-201ENST00000412399 783 ntBASIC14.07□□□□□ -0.16
PPP1R3DO95685 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 GPS2P2-201ENST00000430745 888 ntBASIC14.07□□□□□ -0.16
PPP1R3DO95685 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.07□□□□□ -0.16
PPP1R3DO95685 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms