Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPBO95292 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VAPBO95292 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VAPBO95292 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.65■□□□□ 0.1
VAPBO95292 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VAPBO95292 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.65■□□□□ 0.1
VAPBO95292 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.65■□□□□ 0.1
VAPBO95292 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.65■□□□□ 0.1
VAPBO95292 AC107890.1-201ENST00000422478 521 ntBASIC15.65■□□□□ 0.1
VAPBO95292 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.65■□□□□ 0.1
VAPBO95292 RN7SL618P-201ENST00000477850 296 ntBASIC15.65■□□□□ 0.1
VAPBO95292 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.65■□□□□ 0.1
VAPBO95292 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.65■□□□□ 0.1
VAPBO95292 AC027369.6-201ENST00000525520 931 ntBASIC15.65■□□□□ 0.1
VAPBO95292 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.65■□□□□ 0.1
VAPBO95292 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VAPBO95292 AC010336.2-201ENST00000564226 506 ntBASIC15.65■□□□□ 0.1
VAPBO95292 AC140878.1-201ENST00000565277 250 ntBASIC15.65■□□□□ 0.1
VAPBO95292 AC051619.7-201ENST00000568314 623 ntBASIC15.65■□□□□ 0.1
VAPBO95292 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
VAPBO95292 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.65■□□□□ 0.1
VAPBO95292 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
VAPBO95292 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
VAPBO95292 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.65■□□□□ 0.1
VAPBO95292 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPBO95292 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
VAPBO95292 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
VAPBO95292 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
VAPBO95292 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.64■□□□□ 0.09
VAPBO95292 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.64■□□□□ 0.09
VAPBO95292 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VAPBO95292 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.64■□□□□ 0.09
VAPBO95292 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.64■□□□□ 0.09
VAPBO95292 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.64■□□□□ 0.09
VAPBO95292 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.64■□□□□ 0.09
VAPBO95292 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.64■□□□□ 0.09
VAPBO95292 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.64■□□□□ 0.09
VAPBO95292 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.64■□□□□ 0.09
VAPBO95292 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.64■□□□□ 0.09
VAPBO95292 AC015911.4-201ENST00000588022 1070 ntBASIC15.64■□□□□ 0.09
VAPBO95292 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.64■□□□□ 0.09
VAPBO95292 LINC01115-203ENST00000606068 577 ntBASIC15.64■□□□□ 0.09
VAPBO95292 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
VAPBO95292 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VAPBO95292 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
VAPBO95292 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPBO95292 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
VAPBO95292 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.63■□□□□ 0.09
VAPBO95292 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
VAPBO95292 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VAPBO95292 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VAPBO95292 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.63■□□□□ 0.09
VAPBO95292 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VAPBO95292 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
VAPBO95292 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VAPBO95292 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms