Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 AC091304.2-201ENST00000564639 760 ntBASIC13.55□□□□□ -0.24
HMX3A6NHT5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 AC012313.10-201ENST00000623509 926 ntBASIC13.55□□□□□ -0.24
HMX3A6NHT5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMX3A6NHT5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMX3A6NHT5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMX3A6NHT5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMX3A6NHT5 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMX3A6NHT5 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMX3A6NHT5 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMX3A6NHT5 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMX3A6NHT5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMX3A6NHT5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMX3A6NHT5 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMX3A6NHT5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.55□□□□□ -0.24
HMX3A6NHT5 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 AL022326.1-202ENST00000641533 845 ntBASIC13.54□□□□□ -0.24
HMX3A6NHT5 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 AC083964.2-201ENST00000623988 2396 ntBASIC13.54□□□□□ -0.24
HMX3A6NHT5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.54□□□□□ -0.24
HMX3A6NHT5 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMX3A6NHT5 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMX3A6NHT5 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMX3A6NHT5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMX3A6NHT5 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMX3A6NHT5 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMX3A6NHT5 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMX3A6NHT5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMX3A6NHT5 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMX3A6NHT5 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMX3A6NHT5 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMX3A6NHT5 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMX3A6NHT5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMX3A6NHT5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HMX3A6NHT5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms