Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1DQ9Y2S0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.61■□□□□ 0.89
POLR1DQ9Y2S0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1DQ9Y2S0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1DQ9Y2S0 KRT18P60-201ENST00000312876 1297 ntBASIC20.61■□□□□ 0.89
POLR1DQ9Y2S0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1DQ9Y2S0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1DQ9Y2S0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
POLR1DQ9Y2S0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLR1DQ9Y2S0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1DQ9Y2S0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1DQ9Y2S0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
POLR1DQ9Y2S0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1DQ9Y2S0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
POLR1DQ9Y2S0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1DQ9Y2S0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1DQ9Y2S0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1DQ9Y2S0 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.6■□□□□ 0.89
POLR1DQ9Y2S0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.6■□□□□ 0.89
POLR1DQ9Y2S0 AC087393.1-201ENST00000582896 145 ntBASIC20.6■□□□□ 0.89
POLR1DQ9Y2S0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
POLR1DQ9Y2S0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1DQ9Y2S0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1DQ9Y2S0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.59■□□□□ 0.89
POLR1DQ9Y2S0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.59■□□□□ 0.89
POLR1DQ9Y2S0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1DQ9Y2S0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1DQ9Y2S0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
POLR1DQ9Y2S0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.58■□□□□ 0.89
POLR1DQ9Y2S0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR1DQ9Y2S0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR1DQ9Y2S0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
POLR1DQ9Y2S0 AC139795.1-202ENST00000500444 432 ntBASIC20.58■□□□□ 0.89
POLR1DQ9Y2S0 NTF6A-201ENST00000591175 560 ntBASIC20.58■□□□□ 0.89
POLR1DQ9Y2S0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR1DQ9Y2S0 AC141586.4-201ENST00000624558 1573 ntBASIC20.58■□□□□ 0.88
POLR1DQ9Y2S0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
POLR1DQ9Y2S0 LINC00543-201ENST00000567234 1845 ntBASIC20.57■□□□□ 0.88
POLR1DQ9Y2S0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1DQ9Y2S0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1DQ9Y2S0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1DQ9Y2S0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1DQ9Y2S0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1DQ9Y2S0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1DQ9Y2S0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
POLR1DQ9Y2S0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1DQ9Y2S0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
POLR1DQ9Y2S0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1DQ9Y2S0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.56■□□□□ 0.88
POLR1DQ9Y2S0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1DQ9Y2S0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.56■□□□□ 0.88
POLR1DQ9Y2S0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1DQ9Y2S0 AL592295.1-201ENST00000400984 884 ntBASIC20.56■□□□□ 0.88
POLR1DQ9Y2S0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
POLR1DQ9Y2S0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.56■□□□□ 0.88
POLR1DQ9Y2S0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1DQ9Y2S0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
POLR1DQ9Y2S0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
POLR1DQ9Y2S0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
POLR1DQ9Y2S0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
POLR1DQ9Y2S0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.55■□□□□ 0.88
POLR1DQ9Y2S0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1DQ9Y2S0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1DQ9Y2S0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1DQ9Y2S0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1DQ9Y2S0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
POLR1DQ9Y2S0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1DQ9Y2S0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1DQ9Y2S0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.55■□□□□ 0.88
POLR1DQ9Y2S0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.55■□□□□ 0.88
POLR1DQ9Y2S0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
POLR1DQ9Y2S0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 HLA-L-211ENST00000482052 1765 ntBASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 DUX4L18-201ENST00000553347 1267 ntBASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
POLR1DQ9Y2S0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
POLR1DQ9Y2S0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1DQ9Y2S0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1DQ9Y2S0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
POLR1DQ9Y2S0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.53■□□□□ 0.88
POLR1DQ9Y2S0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1DQ9Y2S0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
POLR1DQ9Y2S0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.53■□□□□ 0.88
POLR1DQ9Y2S0 PKD1P6-201ENST00000343738 4769 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms