Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CALYQ9NYX4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALYQ9NYX4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALYQ9NYX4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.19■□□□□ 0.66
CALYQ9NYX4 AL033527.3-201ENST00000566366 1196 ntBASIC19.19■□□□□ 0.66
CALYQ9NYX4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.19■□□□□ 0.66
CALYQ9NYX4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.19■□□□□ 0.66
CALYQ9NYX4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.19■□□□□ 0.66
CALYQ9NYX4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CALYQ9NYX4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALYQ9NYX4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALYQ9NYX4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CALYQ9NYX4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALYQ9NYX4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALYQ9NYX4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.18■□□□□ 0.66
CALYQ9NYX4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.18■□□□□ 0.66
CALYQ9NYX4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALYQ9NYX4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.18■□□□□ 0.66
CALYQ9NYX4 AC010980.1-201ENST00000587192 1142 ntBASIC19.18■□□□□ 0.66
CALYQ9NYX4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CALYQ9NYX4 AC011551.1-201ENST00000614101 683 ntBASIC19.18■□□□□ 0.66
CALYQ9NYX4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CALYQ9NYX4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CALYQ9NYX4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALYQ9NYX4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CALYQ9NYX4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.17■□□□□ 0.66
CALYQ9NYX4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.17■□□□□ 0.66
CALYQ9NYX4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.17■□□□□ 0.66
CALYQ9NYX4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CALYQ9NYX4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
CALYQ9NYX4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CALYQ9NYX4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CALYQ9NYX4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CALYQ9NYX4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALYQ9NYX4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALYQ9NYX4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.16■□□□□ 0.66
CALYQ9NYX4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.16■□□□□ 0.66
CALYQ9NYX4 PVT1_1.1-201ENST00000615125 194 ntBASIC19.16■□□□□ 0.66
CALYQ9NYX4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALYQ9NYX4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALYQ9NYX4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALYQ9NYX4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.16■□□□□ 0.66
CALYQ9NYX4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CALYQ9NYX4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALYQ9NYX4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.15■□□□□ 0.66
CALYQ9NYX4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALYQ9NYX4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CALYQ9NYX4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.15■□□□□ 0.66
CALYQ9NYX4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CALYQ9NYX4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALYQ9NYX4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CALYQ9NYX4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CALYQ9NYX4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CALYQ9NYX4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALYQ9NYX4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALYQ9NYX4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.14■□□□□ 0.65
CALYQ9NYX4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CALYQ9NYX4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALYQ9NYX4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALYQ9NYX4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CALYQ9NYX4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CALYQ9NYX4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALYQ9NYX4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.13■□□□□ 0.65
CALYQ9NYX4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.13■□□□□ 0.65
CALYQ9NYX4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.13■□□□□ 0.65
CALYQ9NYX4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.13■□□□□ 0.65
CALYQ9NYX4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.13■□□□□ 0.65
CALYQ9NYX4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALYQ9NYX4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.13■□□□□ 0.65
CALYQ9NYX4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CALYQ9NYX4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CALYQ9NYX4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALYQ9NYX4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.12■□□□□ 0.65
CALYQ9NYX4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALYQ9NYX4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALYQ9NYX4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.12■□□□□ 0.65
CALYQ9NYX4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
CALYQ9NYX4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
CALYQ9NYX4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALYQ9NYX4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CALYQ9NYX4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.12■□□□□ 0.65
CALYQ9NYX4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.12■□□□□ 0.65
CALYQ9NYX4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.12■□□□□ 0.65
CALYQ9NYX4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.12■□□□□ 0.65
CALYQ9NYX4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CALYQ9NYX4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CALYQ9NYX4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
CALYQ9NYX4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALYQ9NYX4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALYQ9NYX4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CALYQ9NYX4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.11■□□□□ 0.65
CALYQ9NYX4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CALYQ9NYX4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CALYQ9NYX4 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.11■□□□□ 0.65
CALYQ9NYX4 AC004812.2-201ENST00000611079 2094 ntBASIC19.11■□□□□ 0.65
CALYQ9NYX4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALYQ9NYX4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CALYQ9NYX4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CALYQ9NYX4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CALYQ9NYX4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms