Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
THUMPD1Q9NXG2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
THUMPD1Q9NXG2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
THUMPD1Q9NXG2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
THUMPD1Q9NXG2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
THUMPD1Q9NXG2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
THUMPD1Q9NXG2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
THUMPD1Q9NXG2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THUMPD1Q9NXG2 AC018755.3-202ENST00000596210 929 ntBASIC21.78■■□□□ 1.08
THUMPD1Q9NXG2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
THUMPD1Q9NXG2 HLA-L-211ENST00000482052 1765 ntBASIC21.77■■□□□ 1.08
THUMPD1Q9NXG2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
THUMPD1Q9NXG2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.77■■□□□ 1.08
THUMPD1Q9NXG2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.77■■□□□ 1.08
THUMPD1Q9NXG2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
THUMPD1Q9NXG2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.77■■□□□ 1.08
THUMPD1Q9NXG2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD1Q9NXG2 AC004812.2-201ENST00000611079 2094 ntBASIC21.76■■□□□ 1.07
THUMPD1Q9NXG2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD1Q9NXG2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD1Q9NXG2 RPS2P7-201ENST00000447334 885 ntBASIC21.76■■□□□ 1.07
THUMPD1Q9NXG2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
THUMPD1Q9NXG2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD1Q9NXG2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD1Q9NXG2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
THUMPD1Q9NXG2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
THUMPD1Q9NXG2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
THUMPD1Q9NXG2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.74■■□□□ 1.07
THUMPD1Q9NXG2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
THUMPD1Q9NXG2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
THUMPD1Q9NXG2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
THUMPD1Q9NXG2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
THUMPD1Q9NXG2 DUSP8P5-201ENST00000422884 1815 ntBASIC21.73■■□□□ 1.07
THUMPD1Q9NXG2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
THUMPD1Q9NXG2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
THUMPD1Q9NXG2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.73■■□□□ 1.07
THUMPD1Q9NXG2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
THUMPD1Q9NXG2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.73■■□□□ 1.07
THUMPD1Q9NXG2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
THUMPD1Q9NXG2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.73■■□□□ 1.07
THUMPD1Q9NXG2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
THUMPD1Q9NXG2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
THUMPD1Q9NXG2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.72■■□□□ 1.07
THUMPD1Q9NXG2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
THUMPD1Q9NXG2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
THUMPD1Q9NXG2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
THUMPD1Q9NXG2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
THUMPD1Q9NXG2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.72■■□□□ 1.07
THUMPD1Q9NXG2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
THUMPD1Q9NXG2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.71■■□□□ 1.07
THUMPD1Q9NXG2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.71■■□□□ 1.07
THUMPD1Q9NXG2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
THUMPD1Q9NXG2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
THUMPD1Q9NXG2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
THUMPD1Q9NXG2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
THUMPD1Q9NXG2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
THUMPD1Q9NXG2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.7■■□□□ 1.06
THUMPD1Q9NXG2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.7■■□□□ 1.06
THUMPD1Q9NXG2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
THUMPD1Q9NXG2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.7■■□□□ 1.06
THUMPD1Q9NXG2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
THUMPD1Q9NXG2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
THUMPD1Q9NXG2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 AL592293.1-201ENST00000502889 1188 ntBASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 AC087393.1-201ENST00000582896 145 ntBASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 ABCB10P4-201ENST00000566803 2184 ntBASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
THUMPD1Q9NXG2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
THUMPD1Q9NXG2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms