Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
GAFA1Q96PS6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
GAFA1Q96PS6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
GAFA1Q96PS6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.36■□□□□ 0.69
GAFA1Q96PS6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.36■□□□□ 0.69
GAFA1Q96PS6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.35■□□□□ 0.69
GAFA1Q96PS6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.35■□□□□ 0.69
GAFA1Q96PS6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GAFA1Q96PS6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GAFA1Q96PS6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.35■□□□□ 0.69
GAFA1Q96PS6 AL451085.2-201ENST00000605085 799 ntBASIC19.35■□□□□ 0.69
GAFA1Q96PS6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GAFA1Q96PS6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GAFA1Q96PS6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GAFA1Q96PS6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GAFA1Q96PS6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GAFA1Q96PS6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
GAFA1Q96PS6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.34■□□□□ 0.69
GAFA1Q96PS6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.34■□□□□ 0.69
GAFA1Q96PS6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GAFA1Q96PS6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GAFA1Q96PS6 AF131216.4-201ENST00000638924 1588 ntBASIC19.34■□□□□ 0.69
GAFA1Q96PS6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GAFA1Q96PS6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GAFA1Q96PS6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.34■□□□□ 0.69
GAFA1Q96PS6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GAFA1Q96PS6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GAFA1Q96PS6 LINC01124-201ENST00000409786 2117 ntBASIC19.33■□□□□ 0.69
GAFA1Q96PS6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 AC135731.1-201ENST00000569415 2548 ntBASIC19.33■□□□□ 0.68
GAFA1Q96PS6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GAFA1Q96PS6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GAFA1Q96PS6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GAFA1Q96PS6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.32■□□□□ 0.68
GAFA1Q96PS6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
GAFA1Q96PS6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GAFA1Q96PS6 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GAFA1Q96PS6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.31■□□□□ 0.68
GAFA1Q96PS6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
GAFA1Q96PS6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GAFA1Q96PS6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GAFA1Q96PS6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.31■□□□□ 0.68
GAFA1Q96PS6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GAFA1Q96PS6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GAFA1Q96PS6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
GAFA1Q96PS6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GAFA1Q96PS6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.31■□□□□ 0.68
GAFA1Q96PS6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GAFA1Q96PS6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GAFA1Q96PS6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.3■□□□□ 0.68
GAFA1Q96PS6 AC009299.2-201ENST00000482477 511 ntBASIC19.3■□□□□ 0.68
GAFA1Q96PS6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.3■□□□□ 0.68
GAFA1Q96PS6 AC137630.3-201ENST00000607245 391 ntBASIC19.3■□□□□ 0.68
GAFA1Q96PS6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GAFA1Q96PS6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.3■□□□□ 0.68
GAFA1Q96PS6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GAFA1Q96PS6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GAFA1Q96PS6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GAFA1Q96PS6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.29■□□□□ 0.68
GAFA1Q96PS6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.29■□□□□ 0.68
GAFA1Q96PS6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
GAFA1Q96PS6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.29■□□□□ 0.68
GAFA1Q96PS6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GAFA1Q96PS6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GAFA1Q96PS6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GAFA1Q96PS6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GAFA1Q96PS6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GAFA1Q96PS6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.28■□□□□ 0.68
GAFA1Q96PS6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GAFA1Q96PS6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.28■□□□□ 0.68
GAFA1Q96PS6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
GAFA1Q96PS6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GAFA1Q96PS6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GAFA1Q96PS6 LINC00543-201ENST00000567234 1845 ntBASIC19.28■□□□□ 0.68
GAFA1Q96PS6 AC141586.4-201ENST00000624558 1573 ntBASIC19.27■□□□□ 0.68
GAFA1Q96PS6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GAFA1Q96PS6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GAFA1Q96PS6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
GAFA1Q96PS6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.27■□□□□ 0.68
GAFA1Q96PS6 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.27■□□□□ 0.68
GAFA1Q96PS6 BX664725.1-201ENST00000438252 379 ntBASIC19.27■□□□□ 0.68
GAFA1Q96PS6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GAFA1Q96PS6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GAFA1Q96PS6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GAFA1Q96PS6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
GAFA1Q96PS6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GAFA1Q96PS6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GAFA1Q96PS6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms