Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
PTCD3Q96EY7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
PTCD3Q96EY7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.27
PTCD3Q96EY7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
PTCD3Q96EY7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCD3Q96EY7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PTCD3Q96EY7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCD3Q96EY7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.01■■□□□ 1.27
PTCD3Q96EY7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCD3Q96EY7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PTCD3Q96EY7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PTCD3Q96EY7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCD3Q96EY7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCD3Q96EY7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PTCD3Q96EY7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCD3Q96EY7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23■■□□□ 1.27
PTCD3Q96EY7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23■■□□□ 1.27
PTCD3Q96EY7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
PTCD3Q96EY7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PTCD3Q96EY7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
PTCD3Q96EY7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23■■□□□ 1.27
PTCD3Q96EY7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23■■□□□ 1.27
PTCD3Q96EY7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PTCD3Q96EY7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PTCD3Q96EY7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23■■□□□ 1.27
PTCD3Q96EY7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PTCD3Q96EY7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23■■□□□ 1.27
PTCD3Q96EY7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCD3Q96EY7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.99■■□□□ 1.27
PTCD3Q96EY7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.99■■□□□ 1.27
PTCD3Q96EY7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCD3Q96EY7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCD3Q96EY7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PTCD3Q96EY7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.99■■□□□ 1.27
PTCD3Q96EY7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCD3Q96EY7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCD3Q96EY7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCD3Q96EY7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCD3Q96EY7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
PTCD3Q96EY7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCD3Q96EY7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.98■■□□□ 1.27
PTCD3Q96EY7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCD3Q96EY7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCD3Q96EY7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCD3Q96EY7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCD3Q96EY7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCD3Q96EY7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.97■■□□□ 1.27
PTCD3Q96EY7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PTCD3Q96EY7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.97■■□□□ 1.27
PTCD3Q96EY7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCD3Q96EY7 KRT18P10-201ENST00000388836 1287 ntBASIC22.97■■□□□ 1.27
PTCD3Q96EY7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PTCD3Q96EY7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCD3Q96EY7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
PTCD3Q96EY7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCD3Q96EY7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCD3Q96EY7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PTCD3Q96EY7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PTCD3Q96EY7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCD3Q96EY7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.96■■□□□ 1.27
PTCD3Q96EY7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.96■■□□□ 1.27
PTCD3Q96EY7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.96■■□□□ 1.27
PTCD3Q96EY7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCD3Q96EY7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PTCD3Q96EY7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCD3Q96EY7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCD3Q96EY7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCD3Q96EY7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCD3Q96EY7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCD3Q96EY7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.95■■□□□ 1.26
PTCD3Q96EY7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
PTCD3Q96EY7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCD3Q96EY7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PTCD3Q96EY7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PTCD3Q96EY7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCD3Q96EY7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCD3Q96EY7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
PTCD3Q96EY7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
PTCD3Q96EY7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PTCD3Q96EY7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PTCD3Q96EY7 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.94■■□□□ 1.26
PTCD3Q96EY7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PTCD3Q96EY7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTCD3Q96EY7 AL592293.1-201ENST00000502889 1188 ntBASIC22.93■■□□□ 1.26
PTCD3Q96EY7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.93■■□□□ 1.26
PTCD3Q96EY7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
PTCD3Q96EY7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
PTCD3Q96EY7 ABCB10P4-201ENST00000566803 2184 ntBASIC22.93■■□□□ 1.26
PTCD3Q96EY7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCD3Q96EY7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCD3Q96EY7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.92■■□□□ 1.26
PTCD3Q96EY7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.92■■□□□ 1.26
PTCD3Q96EY7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCD3Q96EY7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCD3Q96EY7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCD3Q96EY7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCD3Q96EY7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCD3Q96EY7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.92■■□□□ 1.26
PTCD3Q96EY7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCD3Q96EY7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms